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Aliases for PIRC78 Gene

Quality Score for this RNA gene is

13

Aliases for PIRC78 Gene

  • Piwi-Interacting RNA Cluster 78 2 3

External Ids for PIRC78 Gene

Previous GeneCards Identifiers for PIRC78 Gene

  • GC00U928217
  • GC15U901188
  • GC15P093938
  • GC15P093444
  • GC15P093648
  • GC15P093787
  • GC15P094458
  • GC15P094980
  • GC15P095227
  • GC15P095466
  • GC15P095703

Summaries for PIRC78 Gene

GeneCards Summary for PIRC78 Gene

PIRC78 (Piwi-Interacting RNA Cluster 78) is an RNA Gene.

PIRC78 is one of the 114 clusters of piRNAs as reported by HGNC

Additional gene information for PIRC78 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and fRNAdb sequence ontologies for PIRC78 Gene

Genomics for PIRC78 Gene

GeneHancer (GH) Regulatory Elements for PIRC78 Gene

Promoters and enhancers for PIRC78 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J093321 Enhancer 0.9 FANTOM5 ENCODE 0.2 -73.6 -73615 0.4 FOXA2 SAP130 ERF DMAP1 ZNF48 RARA ZNF205 ZNF614 IKZF5 NR2F6 ENSG00000257060 PIRC78
GH15J093362 Enhancer 0.5 ENCODE 0.3 -33.1 -33125 0.1 SP1 POLR2A NANOG POU5F1 SIN3A PIRC78 ENSG00000257060
GH15J093322 Enhancer 0.7 ENCODE 0.2 -73.4 -73353 0 FOXA2 SAP130 ERF DMAP1 ZNF48 RARA ZNF205 TEAD3 ZNF614 IKZF5 ENSG00000257060 PIRC78
GH15J093323 Enhancer 0.7 ENCODE 0.2 -73.3 -73265 0.1 FOXA2 SAP130 ERF DMAP1 ZNF48 RARA ZNF205 TEAD3 ZNF614 IKZF5 ENSG00000257060 PIRC78
GH15J093382 Enhancer 0.3 ENCODE 0.4 -13.2 -13165 0.2 MAFK PIRC78 ENSG00000257060
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIRC78 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIRC78 Gene

Genomic Locations for PIRC78 Gene
chr15:93,395,472-93,439,642
(GRCh38/hg38)
Size:
44,171 bases
Orientation:
Plus strand
chr15:93,938,701-93,982,871
(GRCh37/hg19)
Size:
44,171 bases
Orientation:
Plus strand

Genomic View for PIRC78 Gene

Genes around PIRC78 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIRC78 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIRC78 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PIRC78 Gene

Proteins for PIRC78 Gene

Post-translational modifications for PIRC78 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIRC78 Gene

Domains & Families for PIRC78 Gene

Gene Families for PIRC78 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PIRC78: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIRC78 Gene

Function for PIRC78 Gene

Phenotypes From GWAS Catalog for PIRC78 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIRC78 Gene

Localization for PIRC78 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIRC78 Gene

Pathways & Interactions for PIRC78 Gene

SuperPathways for PIRC78 Gene

No Data Available

Interacting Proteins for PIRC78 Gene

Gene Ontology (GO) - Biological Process for PIRC78 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIRC78 Gene

Drugs & Compounds for PIRC78 Gene

No Compound Related Data Available

Transcripts for PIRC78 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIRC78 Gene

No ASD Table

Relevant External Links for PIRC78 Gene

GeneLoc Exon Structure for
PIRC78
ECgene alternative splicing isoforms for
PIRC78

No data available for mRNA/cDNA for PIRC78 Gene

Expression for PIRC78 Gene

NURSA nuclear receptor signaling pathways regulating expression of PIRC78 Gene:

PIRC78
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIRC78 Gene

Orthologs for PIRC78 Gene

No data available for Orthologs and Evolution for PIRC78 Gene

Paralogs for PIRC78 Gene

No data available for Paralogs for PIRC78 Gene

Variants for PIRC78 Gene

Additional Variant Information for PIRC78 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIRC78

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIRC78 Gene

Disorders for PIRC78 Gene

No disorders were found for PIRC78 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIRC78 Gene

Publications for PIRC78 Gene

  1. piRNABank: a web resource on classified and clustered Piwi-interacting RNAs. (PMID: 17881367) Sai Lakshmi S … Agrawal S (Nucleic acids research 2008) 2 3 58

Products for PIRC78 Gene

Sources for PIRC78 Gene

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