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Aliases for PIRC57 Gene

Quality Score for this RNA gene is

13

Aliases for PIRC57 Gene

  • Piwi-Interacting RNA Cluster 57 2 3

External Ids for PIRC57 Gene

Previous GeneCards Identifiers for PIRC57 Gene

  • GC00U929174
  • GC12U901303
  • GC12M121506

Summaries for PIRC57 Gene

GeneCards Summary for PIRC57 Gene

PIRC57 (Piwi-Interacting RNA Cluster 57) is an RNA Gene.

PIRC57 is one of the 114 clusters of piRNAs as reported by HGNC

Additional gene information for PIRC57 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and fRNAdb sequence ontologies for PIRC57 Gene

Genomics for PIRC57 Gene

GeneHancer (GH) Regulatory Elements for PIRC57 Gene

Promoters and enhancers for PIRC57 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J121110 Enhancer 0.9 ENCODE 650.7 -0.9 -867 0.2 ATF1 ARNT ARID4B ZNF2 IRF4 ZNF143 ZFP91 ATF7 RUNX3 RXRA LOC105370030 LOC105370031 PIRC57 P2RX7 P2RX4 KDM2B SRSF9
GH12J121127 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.7 -19688 2.6 HDGF PKNOX1 FOXA2 MLX ARID4B ZNF48 YY1 ZNF121 ZNF766 E2F8 LOC101928346 KDM2B RPL31P52 P2RX7 CAMKK2 COX6A1 P2RX4 PIRC57
GH12J121095 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 +13.6 13622 0.5 HDGF ARID4B SIN3A FEZF1 ZNF2 ZNF48 ZNF143 ZNF548 ATF7 RUNX3 ENSG00000279001 GC12P122218 GC12P122220 PIR38074 PIR47477 PIR45701 GCN1 SETD1B ANAPC5 OASL
GH12J121124 Enhancer 1.1 Ensembl ENCODE 0.4 -15.1 -15065 1.3 FOXA2 ARNT ARID4B NEUROD1 YBX1 ZBTB7B ETS1 YY1 FOS RXRA ANAPC5 RPL29P24 P2RX4 C12orf43 GCN1 SPPL3 UNC119B P2RX7 PIRC57
GH12J121092 Enhancer 0.7 Ensembl ENCODE 0.4 +16.7 16715 0.6 CC2D1A ZNF316 NFATC3 ZNF10 NFYB RUNX3 GC12P122192 GC12P122206 GC12P122211 GC12P122218 GC12P122220 GC12P122224 GC12P122225 GC12P122230 GC12P122238 GC12P122244
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIRC57 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIRC57 Gene

Genomic Locations for PIRC57 Gene
chr12:121,069,193-121,109,616
(GRCh38/hg38)
Size:
40,424 bases
Orientation:
Minus strand
chr12:121,506,996-121,547,419
(GRCh37/hg19)
Size:
40,424 bases
Orientation:
Minus strand

Genomic View for PIRC57 Gene

Genes around PIRC57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIRC57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIRC57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PIRC57 Gene

Proteins for PIRC57 Gene

Post-translational modifications for PIRC57 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIRC57 Gene

Domains & Families for PIRC57 Gene

Gene Families for PIRC57 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PIRC57: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIRC57 Gene

Function for PIRC57 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIRC57 Gene

Localization for PIRC57 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIRC57 Gene

Pathways & Interactions for PIRC57 Gene

SuperPathways for PIRC57 Gene

No Data Available

Interacting Proteins for PIRC57 Gene

Gene Ontology (GO) - Biological Process for PIRC57 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIRC57 Gene

Drugs & Compounds for PIRC57 Gene

No Compound Related Data Available

Transcripts for PIRC57 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIRC57 Gene

No ASD Table

Relevant External Links for PIRC57 Gene

GeneLoc Exon Structure for
PIRC57
ECgene alternative splicing isoforms for
PIRC57

No data available for mRNA/cDNA for PIRC57 Gene

Expression for PIRC57 Gene

NURSA nuclear receptor signaling pathways regulating expression of PIRC57 Gene:

PIRC57
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIRC57 Gene

Orthologs for PIRC57 Gene

No data available for Orthologs and Evolution for PIRC57 Gene

Paralogs for PIRC57 Gene

No data available for Paralogs for PIRC57 Gene

Variants for PIRC57 Gene

Additional Variant Information for PIRC57 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIRC57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIRC57 Gene

Disorders for PIRC57 Gene

No disorders were found for PIRC57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIRC57 Gene

Publications for PIRC57 Gene

  1. piRNABank: a web resource on classified and clustered Piwi-interacting RNAs. (PMID: 17881367) Sai Lakshmi S … Agrawal S (Nucleic acids research 2008) 2 3 58

Products for PIRC57 Gene

Sources for PIRC57 Gene

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