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Aliases for LOC100132287 Gene

Subcategory (RNA class) for LOC100132287 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC100132287 Gene

  • Uncharacterized LOC100132287 3

External Ids for LOC100132287 Gene

Previous GeneCards Identifiers for LOC100132287 Gene

  • GC01U901942
  • GC01P000313
  • GC01P000324
  • GC01P000327
  • GC01P000340
  • GC01P000347

Summaries for LOC100132287 Gene

GeneCards Summary for LOC100132287 Gene

LOC100132287 (Uncharacterized LOC100132287) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100132287 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100132287 Gene

Genomics for LOC100132287 Gene

GeneHancer (GH) Regulatory Elements for LOC100132287 Gene


Top Transcription factor binding sites by QIAGEN in the LOC100132287 gene promoter:
  • AREB6
  • FAC1
  • COUP-TF
  • Evi-1
  • COUP
  • COUP-TF1
  • HNF-4alpha1
  • HNF-4alpha2
  • HOXA9B
  • HOXA9

Genomic Locations for LOC100132287 Gene

Genomic Locations for LOC100132287 Gene
chr1:490,756-495,445
(GRCh38/hg38)
Size:
4,690 bases
Orientation:
Minus strand
chr1:323,892-328,581
(GRCh37/hg19)
Size:
4,690 bases
Orientation:
Plus strand

Genomic View for LOC100132287 Gene

Genes around LOC100132287 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100132287 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100132287 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100132287 Gene

Proteins for LOC100132287 Gene

Post-translational modifications for LOC100132287 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100132287 Gene

Domains & Families for LOC100132287 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100132287 Gene

Function for LOC100132287 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100132287 Gene

Localization for LOC100132287 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100132287 Gene

Pathways & Interactions for LOC100132287 Gene

SuperPathways for LOC100132287 Gene

No Data Available

Interacting Proteins for LOC100132287 Gene

Gene Ontology (GO) - Biological Process for LOC100132287 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100132287 Gene

Drugs & Compounds for LOC100132287 Gene

No Compound Related Data Available

Transcripts for LOC100132287 Gene

mRNA/cDNA for LOC100132287 Gene

(5) Additional mRNA sequences :
(1) RNA Central transcripts :

Unigene Clusters for LOC100132287 Gene

Uncharacterized LOC100132287:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100132287 Gene

No ASD Table

Relevant External Links for LOC100132287 Gene

GeneLoc Exon Structure for
LOC100132287

Expression for LOC100132287 Gene

SOURCE GeneReport for Unigene cluster for LOC100132287 Gene:

Hs.446409
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100132287 Gene

Orthologs for LOC100132287 Gene

No data available for Orthologs and Evolution for LOC100132287 Gene

Paralogs for LOC100132287 Gene

No data available for Paralogs for LOC100132287 Gene

Variants for LOC100132287 Gene

Sequence variations from dbSNP and Humsavar for LOC100132287 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1005439171 -- 494,656(-) G/A non_coding_transcript_variant
rs1038297377 -- 494,443(-) T/A/C non_coding_transcript_variant
rs138542627 -- 492,380(-) G/A non_coding_transcript_variant
rs2792898 -- 491,582(-) C/T non_coding_transcript_variant
rs368711369 -- 494,262(-) C/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100132287 Gene

Variant ID Type Subtype PubMed ID
dgv1n14 CNV gain 18776910
esv27883 CNV gain+loss 19812545
esv28275 CNV gain+loss 19812545
nsv1115327 CNV duplication 24896259
nsv1115712 CNV duplication 24896259
nsv1147083 CNV duplication 26484159
nsv1149141 CNV duplication 26484159
nsv428133 CNV gain 18775914
nsv428223 CNV gain+loss 18775914
nsv471518 CNV gain 19718026
nsv482937 CNV loss 15286789
nsv509114 CNV insertion 20534489
nsv829647 CNV gain+loss 17160897
nsv945712 CNV duplication 23825009
nsv950747 CNV deletion 24416366
nsv953187 CNV deletion 24416366
nsv969031 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100132287 Gene

Disorders for LOC100132287 Gene

Additional Disease Information for LOC100132287

No disorders were found for LOC100132287 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100132287 Gene

Publications for LOC100132287 Gene

  1. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. (PMID: 28339031) Cao Y … Cao D (International journal of oncology 2017) 3 58

Products for LOC100132287 Gene

Sources for LOC100132287 Gene

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