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Aliases for PRSS2 Gene

Aliases for PRSS2 Gene

  • Serine Protease 2 2 3 4 5
  • Anionic Trypsinogen 3 4
  • Protease, Serine 2 2 3
  • Trypsin II 3 4
  • TRYP2 3 4
  • TRY2 3 4
  • Protease Serine 2 Preproprotein 3
  • Protease, Serine, 2 (Trypsin 2) 3
  • Trypsinogen 2 3
  • EC 3.4.21.4 4
  • Trypsin-2 3
  • Trypsin 2 2
  • TRY8 3

External Ids for PRSS2 Gene

Previous GeneCards Identifiers for PRSS2 Gene

  • GC07P140772
  • GC07P140731
  • GC07P141821
  • GC07P141899
  • GC07P141902
  • GC07P141676
  • GC07P141990
  • GC07P142167
  • GC07P142178
  • GC07P142457
  • GC07P142298
  • GC07Pg41870
  • GC07P9T0974
  • GC07P9T0097
  • GC07P142858
  • GC07P142980
  • GC07P143131
  • GC07P143194
  • GC07P143390
  • GC07P143536
  • GC07P143668
  • GC07P143809

Summaries for PRSS2 Gene

Entrez Gene Summary for PRSS2 Gene

  • This gene belongs to the trypsin family of serine proteases and encodes anionic trypsinogen. It is part of a cluster of trypsinogen genes that are located within the T cell receptor beta locus. Enzymes of this family cleave peptide bonds that follow lysine or arginine residues. This protein is found at high levels in pancreatic juice and its upregulation is a characteristic feature of pancreatitis. This protein has also been found to activate pro-urokinase in ovarian tumors, suggesting a function in tumor invasion. In addition, this enzyme is able to cleave across the type II collagen triple helix in rheumatoid arthritis synovitis tissue, potentially participating in the degradation of type II collagen-rich cartilage matrix. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Jan 2015]

GeneCards Summary for PRSS2 Gene

PRSS2 (Serine Protease 2) is a Protein Coding gene. Diseases associated with PRSS2 include Pancreatitis, Hereditary and Pancreatitis. Among its related pathways are Defensins and Innate Immune System. Gene Ontology (GO) annotations related to this gene include calcium ion binding and serine-type endopeptidase activity. An important paralog of this gene is PRSS1.

UniProtKB/Swiss-Prot for PRSS2 Gene

  • In the ileum, may be involved in defensin processing, including DEFA5.

Additional gene information for PRSS2 Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRSS2 Gene

Genomics for PRSS2 Gene

GeneHancer (GH) Regulatory Elements for PRSS2 Gene

Promoters and enhancers for PRSS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J142760 Promoter 0.9 EPDnew 650.7 0.0 -15 0.1 FOSL1 ATF4 SMARCA4 IKZF1 PRDM10 CEBPG FOS ZEB2 PRSS2 PRSS3P1 PRSS1 TRB
GH07J142748 Promoter/Enhancer 0.8 EPDnew ENCODE 0.4 -11.1 -11079 0.9 ATF4 PRSS1 TRBV28 PRSS2 TRB
GH07J142754 Enhancer 0.4 ENCODE 0.4 -5.4 -5433 0.2 FOSL1 JUN CBFA2T2 PRSS2 PRSS1 TRB
GH07J142755 Enhancer 0.4 ENCODE 0.4 -5.2 -5173 0.2 FOSL1 CBFA2T2 PRSS2 PRSS1 TRB
GH07J142742 Enhancer 0.2 ENCODE 0.4 -18.2 -18239 0.1 TRBV29-1 PRSS1 PRSS2 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRSS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PRSS2 Gene

Genomic Locations for PRSS2 Gene
chr7:142,760,398-142,774,564
(GRCh38/hg38)
Size:
14,167 bases
Orientation:
Plus strand

Genomic View for PRSS2 Gene

Genes around PRSS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRSS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRSS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRSS2 Gene

Proteins for PRSS2 Gene

  • Protein details for PRSS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P07478-TRY2_HUMAN
    Recommended name:
    Trypsin-2
    Protein Accession:
    P07478

    Protein attributes for PRSS2 Gene

    Size:
    247 amino acids
    Molecular mass:
    26488 Da
    Cofactor:
    Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
    Quaternary structure:
    No Data Available

neXtProt entry for PRSS2 Gene

Post-translational modifications for PRSS2 Gene

  • Sulfated on tyrosine.
  • Sulfation at Tyr-154 increases selectivity towards basic versus apolar residues at the P2 position of inhibitors that bind in a substrate-like fashion. Although the increase in selectivity is relatively small, it may facilitate digestion of a broader range of dietary proteins.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for PRSS2 Gene

No data available for DME Specific Peptides for PRSS2 Gene

Domains & Families for PRSS2 Gene

Gene Families for PRSS2 Gene

HGNC:
Human Protein Atlas (HPA):
  • Enzymes
  • Plasma proteins
  • Predicted secreted proteins

Suggested Antigen Peptide Sequences for PRSS2 Gene

Graphical View of Domain Structure for InterPro Entry

P07478

UniProtKB/Swiss-Prot:

TRY2_HUMAN :
  • Belongs to the peptidase S1 family.
Family:
  • Belongs to the peptidase S1 family.
genes like me logo Genes that share domains with PRSS2: view

Function for PRSS2 Gene

Molecular function for PRSS2 Gene

UniProtKB/Swiss-Prot Function:
In the ileum, may be involved in defensin processing, including DEFA5.
UniProtKB/Swiss-Prot CatalyticActivity:
Preferential cleavage: Arg- -Xaa, Lys- -Xaa.
GENATLAS Biochemistry:
protease serine 2,trypsin 2,expressed in pancreas

Enzyme Numbers (IUBMB) for PRSS2 Gene

Phenotypes From GWAS Catalog for PRSS2 Gene

Gene Ontology (GO) - Molecular Function for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004222 metalloendopeptidase activity TAS --
GO:0004252 serine-type endopeptidase activity IEA,TAS --
GO:0005509 calcium ion binding IDA 12709065
GO:0005515 protein binding IPI 16192646
GO:0008233 peptidase activity IEA --
genes like me logo Genes that share ontologies with PRSS2: view
genes like me logo Genes that share phenotypes with PRSS2: view

Human Phenotype Ontology for PRSS2 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

Clone Products

No data available for Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRSS2 Gene

Localization for PRSS2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PRSS2 Gene

Secreted, extracellular space.

Subcellular locations from the

Human Protein Atlas (HPA)
  • Endoplasmic reticulum (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IMP 16192646
GO:0031012 extracellular matrix TAS 12731883
GO:0035578 azurophil granule lumen TAS --
genes like me logo Genes that share ontologies with PRSS2: view

No data available for Subcellular locations from COMPARTMENTS for PRSS2 Gene

Pathways & Interactions for PRSS2 Gene

genes like me logo Genes that share pathways with PRSS2: view

Interacting Proteins for PRSS2 Gene

Gene Ontology (GO) - Biological Process for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA,IDA 12731883
GO:0007586 digestion IBA --
GO:0019730 antimicrobial humoral response TAS --
GO:0022617 extracellular matrix disassembly TAS --
GO:0030307 positive regulation of cell growth TAS 12731883
genes like me logo Genes that share ontologies with PRSS2: view

No data available for SIGNOR curated interactions for PRSS2 Gene

Drugs & Compounds for PRSS2 Gene

(16) Drugs for PRSS2 Gene - From: DrugBank, DGIdb, HMDB, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Isopropyl alcohol Approved, Investigational Pharma Target 0
Aprotinin Approved, Investigational, Withdrawn Pharma Inhibitor of bovine pancreatic trypsin 25
calcium Approved Nutra 0
Benzylamine Experimental Pharma Target 0
3-Phenylpropylamine Experimental Pharma Target 0

(1) Additional Compounds for PRSS2 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with PRSS2: view

Transcripts for PRSS2 Gene

mRNA/cDNA for PRSS2 Gene

(2) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PRSS2 Gene

Protease, serine, 2 (trypsin 2):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PRSS2 Gene

No ASD Table

Relevant External Links for PRSS2 Gene

GeneLoc Exon Structure for
PRSS2
ECgene alternative splicing isoforms for
PRSS2

Expression for PRSS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PRSS2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for PRSS2 Gene

This gene is overexpressed in Pancreatic juice (47.9) and Pancreas (14.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for PRSS2 Gene



Protein tissue co-expression partners for PRSS2 Gene

NURSA nuclear receptor signaling pathways regulating expression of PRSS2 Gene:

PRSS2

SOURCE GeneReport for Unigene cluster for PRSS2 Gene:

Hs.726742

mRNA Expression by UniProt/SwissProt for PRSS2 Gene:

P07478-TRY2_HUMAN
Tissue specificity: Expressed in Paneth cells, at the base of small intestinal crypts.

Phenotype-based relationships between genes and organs from Gene ORGANizer for PRSS2 Gene

Germ Layers:
  • ectoderm
  • endoderm
  • mesoderm
Systems:
  • cardiovascular
  • digestive
  • endocrine
  • immune
  • nervous
  • respiratory
  • urinary
Regions:
Head and neck:
  • brain
  • ear
  • eye
  • head
Thorax:
  • diaphragm
  • esophagus
  • heart
  • lung
Abdomen:
  • intestine
  • kidney
  • large intestine
  • pancreas
  • small intestine
  • stomach
General:
  • blood
  • blood vessel
  • coagulation system
  • peripheral nerve
  • peripheral nervous system
  • white blood cell
genes like me logo Genes that share expression patterns with PRSS2: view

No data available for mRNA differential expression in normal tissues and Evidence on tissue expression from TISSUES for PRSS2 Gene

Orthologs for PRSS2 Gene

This gene was present in the common ancestor of animals.

Orthologs for PRSS2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC100615529 33
  • 96.71 (n)
dog
(Canis familiaris)
Mammalia LOC100686744 33
  • 85.43 (n)
cow
(Bos Taurus)
Mammalia PRSS2 33
  • 84.08 (n)
rat
(Rattus norvegicus)
Mammalia Prss1 33
  • 81.44 (n)
mouse
(Mus musculus)
Mammalia Prss2 16 33
  • 81.03 (n)
chicken
(Gallus gallus)
Aves PRSS2 33
  • 70.85 (n)
tropical clawed frog
(Silurana tropicalis)
Amphibia try10 33
  • 68.59 (n)
Str.8261 33
zebrafish
(Danio rerio)
Actinopterygii si:ch73-103b2.3 33
  • 69.06 (n)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8654 33
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009966 33
  • 51.73 (n)
fruit fly
(Drosophila melanogaster)
Insecta Try29F 35
  • 43 (a)
CG18735 35
  • 42 (a)
CG4386 35
  • 42 (a)
CG8299 35
  • 38 (a)
&egr;Try 35
  • 38 (a)
CG17239 35
  • 37 (a)
CG6041 35
  • 37 (a)
CG17571 35
  • 37 (a)
CG9294 35
  • 37 (a)
CG18065 35
  • 37 (a)
CG5197 35
  • 37 (a)
&lgr;Try 35
  • 37 (a)
&zgr;Try 35
  • 36 (a)
&eegr;Try 35
  • 35 (a)
CG16998 35
  • 35 (a)
CG7829 35
  • 34 (a)
CG10472 35
  • 34 (a)
&kgr;Try 35
  • 33 (a)
Species where no ortholog for PRSS2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PRSS2 Gene

ENSEMBL:
Gene Tree for PRSS2 (if available)
TreeFam:
Gene Tree for PRSS2 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for PRSS2: view image

Paralogs for PRSS2 Gene

Paralogs for PRSS2 Gene

Pseudogenes.org Pseudogenes for PRSS2 Gene

genes like me logo Genes that share paralogs with PRSS2: view

Variants for PRSS2 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for PRSS2 Gene

TRY2_HUMAN-P07478
His-153 variation is a common polymorphism in African populations with a minor allele frequency of 9.2%, it eliminates sulfation at Tyr-154, with no consequences on digestive physiology.

Sequence variations from dbSNP and Humsavar for PRSS2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs61734659 protective, Pancreatitis, chronic, protection against 142,774,035(+) G/A coding_sequence_variant, missense_variant, non_coding_transcript_variant
rs1001237275 -- 142,770,317(+) C/A upstream_transcript_variant
rs1001472227 -- 142,774,526(+) C/T 3_prime_UTR_variant, non_coding_transcript_variant
rs1003582335 -- 142,771,353(+) T/C intron_variant
rs1003583698 -- 142,771,444(+) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for PRSS2 Gene

Variant ID Type Subtype PubMed ID
dgv11644n54 CNV loss 21841781
dgv11652n54 CNV loss 21841781
dgv1968e212 CNV gain 25503493
dgv1969e212 CNV loss 25503493
dgv841n27 CNV loss 19166990
esv2759569 CNV loss 17122850
esv34617 CNV loss 17911159
esv3576450 CNV gain 25503493
nsv1028035 CNV loss 25217958
nsv428187 CNV loss 18775914
nsv465148 CNV loss 19166990
nsv470396 CNV loss 18288195
nsv5982 CNV deletion 18451855
nsv818563 CNV loss 17921354
nsv824336 CNV loss 20364138
nsv831167 CNV gain+loss 17160897

Additional Variant Information for PRSS2 Gene

Human Gene Mutation Database (HGMD)
PRSS2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRSS2

SNP Genotyping and Copy Number Assay Products

No data available for Variation tolerance for PRSS2 Gene

Disorders for PRSS2 Gene

MalaCards: The human disease database

(5) MalaCards diseases for PRSS2 Gene - From: HGMD, OMIM, ClinVar, GTR, Orphanet, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
pancreatitis, hereditary
  • pctt
pancreatitis
linitis plastica
  • leather-bottle stomach
tropical calcific pancreatitis
  • tcp
synovitis
- elite association - COSMIC cancer census association via MalaCards
Search PRSS2 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for PRSS2

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with PRSS2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for PRSS2 Gene

Publications for PRSS2 Gene

  1. A common African polymorphism abolishes tyrosine sulfation of human anionic trypsinogen (PRSS2). (PMID: 18986305) Rónai Z … Sahin-Tóth M (The Biochemical journal 2009) 3 4 22 58
  2. Cloning, characterization and nucleotide sequences of two cDNAs encoding human pancreatic trypsinogens. (PMID: 3011602) Emi M … Matsubara K (Gene 1986) 2 3 4 58
  3. Identification of pancreatic juice proteins as biomarkers of pancreatic cancer. (PMID: 20428826) Gao J … Ma L (Oncology reports 2010) 3 22 58
  4. Divergent roles of SPINK1 and PRSS2 variants in tropical calcific pancreatitis. (PMID: 19077465) Sundaresan S … Drenth JP (Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.] 2009) 3 22 58
  5. Polymorphic variants in hereditary pancreatic cancer genes are not associated with pancreatic cancer risk. (PMID: 19690177) McWilliams RR … Petersen GM (Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2009) 3 44 58

Products for PRSS2 Gene

Sources for PRSS2 Gene

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