tRX-Asp-NNN-1-1 Gene (RNA Gene)

 

GC06M029224
GIFtS:
2
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Aliases for tRX-Asp-NNN-1-1 Gene

Subcategory (RNA class) for tRX-Asp-NNN-1-1 Gene

tRNA

Number of RNA Genes sources:

1 / 17

Aliases for tRX-Asp-NNN-1-1 Gene

  • TRX-Asp-NNN-1-1 162

Previous GeneCards Identifiers for tRX-Asp-NNN-1-1 Gene

  • GC06M029116

No data available for External Ids for tRX-Asp-NNN-1-1 Gene

Summaries for tRX-Asp-NNN-1-1 Gene

GeneCards Summary for tRX-Asp-NNN-1-1 Gene

tRX-Asp-NNN-1-1 is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for tRX-Asp-NNN-1-1 Gene

Additional gene information for tRX-Asp-NNN-1-1 Gene


  • Search for tRX-Asp-NNN-1-1 at DataMed
  • Search for tRX-Asp-NNN-1-1 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for tRX-Asp-NNN-1-1 Gene

Genomics for tRX-Asp-NNN-1-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for tRX-Asp-NNN-1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J028838 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas 0.4 -11.0 -11017 3 ZNF221 CREB1 GATAD2A CTCF TEAD4 PRDM10 ZNF629 TFE3 ZNF512 LEF1 ENSG00000225173 TRA-AGC2-1 piR-36252-005 ZSCAN12 TRIM27 ZSCAN23 ZSCAN26 ZKSCAN4 PGBD1 ZKSCAN8
GH06J028836 Enhancer 0.6 ENCODE 0.4 -9.4 -9365 0 MTA1 ZNF341 ZBTB44 ZNF580 TBP ADNP ZSCAN23 CEBPB CEBPG ZBTB33 TRA-AGC2-1 piR-36252-005 LINC01556 HCG14 TRIM27 ZKSCAN4 GABBR1 SUMO2P1 ENSG00000225173 tRX-Asp-NNN-1-1
GH06J028837 Enhancer 0.6 ENCODE 0.4 -9.5 -9485 0 MTA1 ZNF341 ZBTB44 ZNF580 TBP ADNP ZSCAN23 CEBPB CEBPG ZBTB33 TRA-AGC2-1 piR-36252-005 LINC01556 HCG14 TRIM27 ZKSCAN4 GABBR1 SUMO2P1 ENSG00000225173 tRX-Asp-NNN-1-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around tRX-Asp-NNN-1-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for tRX-Asp-NNN-1-1 Gene

Genomic Locations for tRX-Asp-NNN-1-1 Gene
chr6:28,827,413-28,827,484
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand

Genomic View for tRX-Asp-NNN-1-1 Gene

Genes around tRX-Asp-NNN-1-1 on UCSC Golden Path with GeneCards custom track
tRX-Asp-NNN-1-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

tRX-Asp-NNN-1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for tRX-Asp-NNN-1-1 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for tRX-Asp-NNN-1-1 Gene

Proteins for tRX-Asp-NNN-1-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for tRX-Asp-NNN-1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for tRX-Asp-NNN-1-1 Gene

Domains & Families for tRX-Asp-NNN-1-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for tRX-Asp-NNN-1-1 Gene

Function for tRX-Asp-NNN-1-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for tRX-Asp-NNN-1-1 Gene

Localization for tRX-Asp-NNN-1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for tRX-Asp-NNN-1-1 Gene

Pathways & Interactions for tRX-Asp-NNN-1-1 Gene

PathCards logo

SuperPathways for tRX-Asp-NNN-1-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for tRX-Asp-NNN-1-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for tRX-Asp-NNN-1-1 Gene

Drugs & Compounds for tRX-Asp-NNN-1-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for tRX-Asp-NNN-1-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for tRX-Asp-NNN-1-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000C8E9C9_9606 tRNA 72 1

GtRNAdb: tRX-Asp-NNN-1-1:CM000668.1:28795190-28795261, tRX-Asp-NNN-1-1:CM000668.2:28827413-28827484,

tRX-Asp-NNN-1-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for tRX-Asp-NNN-1-1 Gene

No ASD Table

Relevant External Links for tRX-Asp-NNN-1-1 Gene

GeneLoc Exon Structure for
tRX-Asp-NNN-1-1

No data available for mRNA/cDNA for tRX-Asp-NNN-1-1 Gene

Expression for tRX-Asp-NNN-1-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for tRX-Asp-NNN-1-1 Gene

Orthologs for tRX-Asp-NNN-1-1 Gene

No data available for Orthologs and Evolution for tRX-Asp-NNN-1-1 Gene

Paralogs for tRX-Asp-NNN-1-1 Gene

No data available for Paralogs for tRX-Asp-NNN-1-1 Gene

Variants for tRX-Asp-NNN-1-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for tRX-Asp-NNN-1-1 Gene

Disorders for tRX-Asp-NNN-1-1 Gene

No disorders were found for tRX-Asp-NNN-1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for tRX-Asp-NNN-1-1 Gene

Publications for tRX-Asp-NNN-1-1 Gene

No publications were found for tRX-Asp-NNN-1-1 Gene.

No data available for Mastermind for tRX-Asp-NNN-1-1 Gene

Products for tRX-Asp-NNN-1-1 Gene

Sources for tRX-Asp-NNN-1-1 Gene