Aliases for piR-60246-100 Gene

Subcategory (RNA class) for piR-60246-100 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-60246-100 Gene

No data available for External Ids for piR-60246-100 Gene

Summaries for piR-60246-100 Gene

GeneCards Summary for piR-60246-100 Gene

piR-60246-100 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-60246-100 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-60246-100 Gene

Genomics for piR-60246-100 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-60246-100 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J043578 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 -1.6 -1621 1.7 FOXA1 CTBP1 CUX1 GATA3 DPF2 JUND HLF SMARCE1 piR-60246-100 HSF2BP PDXK FRGCA AGPAT3 SIK1 H2BS1 MIR6070
GH21J043595 Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -27.4 -27358 20.2 ARHGAP35 HNRNPL CREB1 GATAD2A CTCF ZBTB33 YBX1 ZNF629 PRDM10 TFE3 RRP1B ENSG00000184441 WDR4 PWP2 HSF2BP U2AF1 ENSG00000233754 CFAP410 SIK1 PDXK
GH21J043585 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 -8.8 -8832 3.1 CREB1 GATAD2A TEAD4 TFE3 SOX13 RCOR2 FOXA1 PRDM1 RXRB IRF2 PDXK FRGCA piR-60246-100 H2BS1 MIR6070 HSF2BP
GH21J043573 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 +2.9 2851 2.6 ZIC2 NRF1 SPI1 HSF2BP PDXK SIK1 piR-60246-100 H2BS1 piR-45532-002
GH21J043588 Enhancer 1.1 ENCODE dbSUPER 0.4 -12.7 -12689 4 GATAD2A ATF7 TFE3 SOX13 RCOR2 JUND FOXA1 PKNOX1 RXRB IRF2 HSF2BP PDXK SIK1 FRGCA RRP1B piR-60246-100 MIR6070 H2BS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-60246-100 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-60246-100 Gene

Genomic Locations for piR-60246-100 Gene
chr21:43,577,723-43,577,752
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-60246-100 Gene

Genes around piR-60246-100 on UCSC Golden Path with GeneCards custom track
piR-60246-100 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-60246-100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-60246-100 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-60246-100 Gene

Proteins for piR-60246-100 Gene

Post-translational modifications for piR-60246-100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-60246-100 Gene

Domains & Families for piR-60246-100 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-60246-100 Gene

Function for piR-60246-100 Gene

Phenotypes From GWAS Catalog for piR-60246-100 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-60246-100 Gene

Localization for piR-60246-100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-60246-100 Gene

Pathways & Interactions for piR-60246-100 Gene

PathCards logo

SuperPathways for piR-60246-100 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-60246-100 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-60246-100 Gene

Drugs & Compounds for piR-60246-100 Gene

No Compound Related Data Available

Transcripts for piR-60246-100 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-60246-100 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000287613_9606 piRNA 29 1

ENA: DQ595753.1:1..29:ncRNA,

URS0000429219_9606 piRNA 29 1

ENA: DQ594134.1:1..29:ncRNA,

piR-60246-100 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-60246-100 Gene

No ASD Table

Relevant External Links for piR-60246-100 Gene

GeneLoc Exon Structure for
piR-60246-100

No data available for mRNA/cDNA for piR-60246-100 Gene

Expression for piR-60246-100 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-60246-100 Gene

Orthologs for piR-60246-100 Gene

No data available for Orthologs and Evolution for piR-60246-100 Gene

Paralogs for piR-60246-100 Gene

No data available for Paralogs for piR-60246-100 Gene

Variants for piR-60246-100 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-60246-100 Gene

Disorders for piR-60246-100 Gene

No disorders were found for piR-60246-100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-60246-100 Gene

Publications for piR-60246-100 Gene

No publications were found for piR-60246-100 Gene.

No data available for Mastermind for piR-60246-100 Gene

Products for piR-60246-100 Gene

Sources for piR-60246-100 Gene