piR-60152 Gene (RNA Gene)

 

GC04P086967
GIFtS:
3
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Aliases for piR-60152 Gene

Subcategory (RNA class) for piR-60152 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-60152 Gene

  • PiR-60152 161

No data available for External Ids for piR-60152 Gene

Summaries for piR-60152 Gene

GeneCards Summary for piR-60152 Gene

piR-60152 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-60152 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-60152 Gene

Genomics for piR-60152 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-60152 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J086967 Enhancer 0.9 ENCODE dbSUPER 600.7 +0.7 717 0.4 IKZF1 MTA2 MTA1 ZNF24 HDAC1 SOX6 CTBP1 HDAC2 GATAD2A NCOR1 piR-60152 AFF1 C4orf36 piR-43583-415 ENSG00000285458 KLHL8
GH04J086965 Enhancer 0.6 dbSUPER 600.7 -0.9 -925 1.7 RELA PKNOX1 IKZF2 EED RELB EGR1 FOXA2 ZKSCAN1 ELF1 NBN piR-60152 AFF1 C4orf36 TECRP1 ENSG00000285458 KLHL8
GH04J086968 Enhancer 0.6 ENCODE dbSUPER 600.7 +1.4 1439 0.2 HMBOX1 OSR2 DPF2 piR-60152 AFF1 C4orf36 ENSG00000251411 piR-43583-415 ENSG00000285458 KLHL8
GH04J086958 Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -5.6 -5577 5.2 GATAD2A TEAD4 ZNF629 ZNF512 LEF1 IKZF1 ZNF692 POLR2A JUND PRDM1 AFF1 C4orf36 ENSG00000251411 MAPK10 NUDT9 KLHL8 piR-60152 TECRP1 ENSG00000285458
GH04J086963 Enhancer 0.9 ENCODE dbSUPER 0.7 -2.6 -2581 0.2 JUND ZNF24 EP300 CBX3 NFE2 HDAC2 ZNF316 TRIM24 FOSL1 MAFG AFF1 C4orf36 piR-60152 TECRP1 ENSG00000285458 KLHL8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-60152 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-60152 Gene

Genomic Locations for piR-60152 Gene
chr4:86,966,505-86,966,535
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand

Genomic View for piR-60152 Gene

Genes around piR-60152 on UCSC Golden Path with GeneCards custom track
piR-60152 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-60152 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-60152 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-60152 Gene

Proteins for piR-60152 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-60152 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-60152 Gene

Domains & Families for piR-60152 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-60152 Gene

Function for piR-60152 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-60152 Gene

Localization for piR-60152 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-60152 Gene

Pathways & Interactions for piR-60152 Gene

PathCards logo

SuperPathways for piR-60152 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-60152 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-60152 Gene

Drugs & Compounds for piR-60152 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-60152 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-60152 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005E0942_9606 piRNA 31 1

ENA: DQ594040.1:1..31:ncRNA,

piR-60152 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-60152 Gene

No ASD Table

Relevant External Links for piR-60152 Gene

GeneLoc Exon Structure for
piR-60152

No data available for mRNA/cDNA for piR-60152 Gene

Expression for piR-60152 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-60152 Gene

Orthologs for piR-60152 Gene

No data available for Orthologs and Evolution for piR-60152 Gene

Paralogs for piR-60152 Gene

No data available for Paralogs for piR-60152 Gene

Variants for piR-60152 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-60152 Gene

Disorders for piR-60152 Gene

No disorders were found for piR-60152 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-60152 Gene

Publications for piR-60152 Gene

No publications were found for piR-60152 Gene.

No data available for Mastermind for piR-60152 Gene

Products for piR-60152 Gene

Sources for piR-60152 Gene