Aliases for piR-59558-004 Gene

Subcategory (RNA class) for piR-59558-004 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-59558-004 Gene

No data available for External Ids for piR-59558-004 Gene

Summaries for piR-59558-004 Gene

GeneCards Summary for piR-59558-004 Gene

piR-59558-004 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-59558-004 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-59558-004 Gene

Genomics for piR-59558-004 Gene

GeneHancer (GH) Regulatory Elements for piR-59558-004 Gene

Promoters and enhancers for piR-59558-004 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J200199 Enhancer 0.8 Ensembl ENCODE 0.7 -2.5 -2537 6.1 CTCF TEAD4 ZIC2 POLR2A FOXA2 YY1 NANOG MEF2B SPI1 ETS1 ENSG00000232732 piR-59558-004 piR-30449-088
GH02J200219 Enhancer 1.1 Ensembl ENCODE 0.4 +16.7 16686 3.1 FOXK2 TCF12 POLR2G NCOR1 KDM6A TCF7 FOXA1 ZBTB25 TGIF2 SKI SPATS2L ENSG00000232732 FTCDNL1 HSALNG0021460 piR-59558-004
GH02J200213 Enhancer 0.5 Ensembl CraniofacialAtlas 0.4 +9.4 9432 0.8 SMARCA4 HNF4A ENSG00000232732 piR-59558-004 HSALNG0021460
GH02J200184 Enhancer 0.6 Ensembl 0.4 -18.5 -18468 1.4 EP300 MXI1 ESR1 JUND ZNF189 CBX2 RAD21 FEZF1 RXRA MAX piR-30449-088 piR-59558-004
GH02J200176 Enhancer 0.5 Ensembl ENCODE 0.3 -25.4 -25398 3.2 POLR2A SMARCA4 ENSG00000232732 SPATS2L piR-30449-088 piR-59558-004
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-59558-004 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-59558-004 Gene

Genomic Locations for piR-59558-004 Gene
chr2:200,203,969-200,203,998
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-59558-004 Gene

Genes around piR-59558-004 on UCSC Golden Path with GeneCards custom track

piR-59558-004 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-59558-004 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-59558-004 Gene

Proteins for piR-59558-004 Gene

Post-translational modifications for piR-59558-004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-59558-004 Gene

Domains & Families for piR-59558-004 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-59558-004 Gene

Function for piR-59558-004 Gene

Phenotypes From GWAS Catalog for piR-59558-004 Gene

miRNA for piR-59558-004 Gene

miRTarBase miRNAs that target piR-59558-004

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-59558-004 Gene

Localization for piR-59558-004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-59558-004 Gene

Pathways & Interactions for piR-59558-004 Gene

PathCards logo

SuperPathways for piR-59558-004 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-59558-004 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-59558-004 Gene

Drugs & Compounds for piR-59558-004 Gene

No Compound Related Data Available

Transcripts for piR-59558-004 Gene

mRNA/cDNA for piR-59558-004 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for piR-59558-004 Gene

No ASD Table

Relevant External Links for piR-59558-004 Gene

GeneLoc Exon Structure for
piR-59558-004

Expression for piR-59558-004 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-59558-004 Gene

Orthologs for piR-59558-004 Gene

No data available for Orthologs and Evolution for piR-59558-004 Gene

Paralogs for piR-59558-004 Gene

No data available for Paralogs for piR-59558-004 Gene

Variants for piR-59558-004 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-59558-004 Gene

Disorders for piR-59558-004 Gene

No disorders were found for piR-59558-004 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-59558-004 Gene

Publications for piR-59558-004 Gene

No publications were found for piR-59558-004 Gene.

No data available for Mastermind for piR-59558-004 Gene

Products for piR-59558-004 Gene

Sources for piR-59558-004 Gene