Aliases for piR-59262-004 Gene

Data sources for piR-59262-004 Gene:

Subcategory (RNA class) for piR-59262-004 Gene

piRNA

Aliases for piR-59262-004 Gene

  • PiR-59262 (ENA)

Previous GeneCards Identifiers for piR-59262-004 Gene

  • GC02P062147
  • GC02P062153
  • GC02P062157

No data available for External Ids for piR-59262-004 Gene

Summaries for piR-59262-004 Gene

GeneCards Summary for piR-59262-004 Gene

piR-59262-004 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-59262-004 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-59262-004 Gene

Genomics for piR-59262-004 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-59262-004 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J062145 Enhancer 0.8 Ensembl ENCODE 250.7 -0.9 -892 0.6 BCL11A TRIM22 EBF1 SPI1 ELF1 IKZF1 HDGF ATF2 BACH1 TCF12 piR-61223-010 piR-59262-004 RPSAP26 FAM161A LOC107985768 ENSG00000229839 B3GNT2 lnc-CCT4-2 CCT4 COMMD1
GH02J062144 Enhancer 0.5 Ensembl 250.7 -1.8 -1792 0.8 HNF4A HDGF NFIL3 ATF7 HLF ZNF687 NBN RPSAP26 piR-61223-010 piR-59262-004 ENSG00000273302 LOC107985768 B3GNT2 ENSG00000229839 lnc-CCT4-2 CCT4 COMMD1
GH02J062148 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.7 +2.5 2544 4.7 SIN3A EBF1 FOSL1 JUND IKZF1 HDGF RCOR1 BHLHE40 GATA2 ARID1B lnc-COMMD1-3 B3GNT2 ENSG00000273302 FAM161A piR-59262-004 RPSAP26 ENSG00000229839 lnc-CCT4-2 CCT4 COMMD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-59262-004 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-59262-004 Gene

Latest Assembly
chr2:62,146,793-62,146,822
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-59262-004 Gene

Genes around piR-59262-004 on UCSC Golden Path with GeneCards custom track
piR-59262-004 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-59262-004 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-59262-004 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-59262-004 Gene

Proteins for piR-59262-004 Gene

Post-translational modifications for piR-59262-004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-59262-004 Gene

Domains & Families for piR-59262-004 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-59262-004 Gene

Function for piR-59262-004 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-59262-004 Gene

Localization for piR-59262-004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-59262-004 Gene

Pathways & Interactions for piR-59262-004 Gene

PathCards logo

SuperPathways for piR-59262-004 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-59262-004 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-59262-004 Gene

Drugs & Compounds for piR-59262-004 Gene

No Compound Related Data Available

Transcripts for piR-59262-004 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-59262-004 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005FA1E4_9606 piRNA 30 1

ENA: DQ592150.1:1..30:ncRNA,

piR-59262-004 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-59262-004 Gene

No ASD Table

Relevant External Links for piR-59262-004 Gene

GeneLoc Exon Structure for
piR-59262-004

No data available for mRNA/cDNA for piR-59262-004 Gene

Expression for piR-59262-004 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-59262-004 Gene

Orthologs for piR-59262-004 Gene

No data available for Orthologs and Evolution for piR-59262-004 Gene

Paralogs for piR-59262-004 Gene

No data available for Paralogs for piR-59262-004 Gene

Variants for piR-59262-004 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-59262-004 Gene

Disorders for piR-59262-004 Gene

No disorders were found for piR-59262-004 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-59262-004 Gene

Publications for piR-59262-004 Gene

No publications were found for piR-59262-004 Gene.

No data available for Mastermind for piR-59262-004 Gene

Products for piR-59262-004 Gene

Sources for piR-59262-004 Gene