Aliases for piR-58648 Gene

Subcategory (RNA class) for piR-58648 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-58648 Gene

  • PiR-58648 161

No data available for External Ids for piR-58648 Gene

Summaries for piR-58648 Gene

GeneCards Summary for piR-58648 Gene

piR-58648 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-58648 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-58648 Gene

Genomics for piR-58648 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-58648 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J025950 Enhancer 0.5 Ensembl 600.7 0.0 -45 0.2 ZNF316 MAFF MAFK MAFG EMSY piR-58648 RASSF8 RASSF8-AS1 LMNTD1
GH12J025951 Enhancer 0.4 Ensembl 600.7 -0.4 -445 0.2 JUN JUND FOS KLF1 piR-58648 RASSF8 RASSF8-AS1 LMNTD1
GH12J025923 Enhancer 0.7 Ensembl ENCODE 0.3 +25.8 25809 1.7 ZIC2 SCRT2 RCOR1 ZBTB17 TCF7L2 GTF3C2 ZNF366 JUN FOS ZFP37 RASSF8 RASSF8-AS1 piR-39701-010 piR-58648 LMNTD1
GH12J025929 Enhancer 0.6 Ensembl 0.4 +21.2 21155 0.6 OSR2 BCL11A KLF13 WT1 ZNF184 HIC1 ZNF843 GLIS1 ZNF398 INSM2 RASSF8 RASSF8-AS1 piR-39701-010 piR-58648 LMNTD1
GH12J025935 Enhancer 0.5 Ensembl 0.4 +14.4 14355 1 ZNF766 ZNF316 MAFG NFE2L2 EMSY MAFK RASSF8 RASSF8-AS1 piR-58648 piR-39701-010 LMNTD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-58648 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-58648 Gene

Genomic Locations for piR-58648 Gene
chr12:25,950,426-25,950,456
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-58648 Gene

Genes around piR-58648 on UCSC Golden Path with GeneCards custom track
piR-58648 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-58648 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-58648 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-58648 Gene

Proteins for piR-58648 Gene

Post-translational modifications for piR-58648 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-58648 Gene

Domains & Families for piR-58648 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-58648 Gene

Function for piR-58648 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-58648 Gene

Localization for piR-58648 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-58648 Gene

Pathways & Interactions for piR-58648 Gene

PathCards logo

SuperPathways for piR-58648 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-58648 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-58648 Gene

Drugs & Compounds for piR-58648 Gene

No Compound Related Data Available

Transcripts for piR-58648 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-58648 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000604158_9606 piRNA 31 1

ENA: DQ591536.1:1..31:ncRNA,

piR-58648 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-58648 Gene

No ASD Table

Relevant External Links for piR-58648 Gene

GeneLoc Exon Structure for
piR-58648

No data available for mRNA/cDNA for piR-58648 Gene

Expression for piR-58648 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-58648 Gene

Orthologs for piR-58648 Gene

No data available for Orthologs and Evolution for piR-58648 Gene

Paralogs for piR-58648 Gene

No data available for Paralogs for piR-58648 Gene

Variants for piR-58648 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-58648 Gene

Disorders for piR-58648 Gene

No disorders were found for piR-58648 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-58648 Gene

Publications for piR-58648 Gene

No publications were found for piR-58648 Gene.

No data available for Mastermind for piR-58648 Gene

Products for piR-58648 Gene

Sources for piR-58648 Gene