Aliases for piR-57879 Gene

Subcategory (RNA class) for piR-57879 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-57879 Gene

  • PiR-57879 166

No data available for External Ids for piR-57879 Gene

Summaries for piR-57879 Gene

GeneCards Summary for piR-57879 Gene

piR-57879 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-57879 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-57879 Gene

Genomics for piR-57879 Gene

GeneHancer (GH) Regulatory Elements for piR-57879 Gene

Promoters and enhancers for piR-57879 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J014435 Enhancer 0.8 FANTOM5 Ensembl ENCODE 750.6 -0.1 -143 3.2 MAFK ZNF316 EMSY piR-57879 MIR193B MIR193BHG LOC100505915 LOC105371094 PARN
GH16J014475 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -39.5 -39523 2 RBPJ ATF1 MIXL1 MNT ELF3 SP1 MYC ZNF24 PPARG KAT8 LOC105371094 piR-57879 PARN
GH16J014418 Enhancer 0.8 Ensembl ENCODE 0.4 +16.9 16902 1.6 RAD21 SP1 PRDM1 MTA1 IKZF1 RXRA ZNF512 JUND NR2F2 ZNF366 ENSG00000263257 RRN3 piR-57879
GH16J014441 Enhancer 0.6 Ensembl CraniofacialAtlas 0.4 -5.4 -5394 1.1 SP7 PKNOX1 ZIC2 GLIS1 PDXDC1 MIR193BHG piR-57879 LOC105371094 PARN
GH16J014455 Enhancer 0.7 Ensembl 0.4 -19.1 -19123 0.8 SP7 PKNOX1 CREB1 REST PRDM10 ZEB2 ZNF629 CEBPB JUN JUND MIR193B piR-57879 LOC105371094 PARN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-57879 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-57879 Gene

Genomic Locations for piR-57879 Gene
chr16:14,436,449-14,436,478
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-57879 Gene

Genes around piR-57879 on UCSC Golden Path with GeneCards custom track

piR-57879 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-57879 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-57879 Gene

Proteins for piR-57879 Gene

Post-translational modifications for piR-57879 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-57879 Gene

Domains & Families for piR-57879 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-57879 Gene

Function for piR-57879 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-57879 Gene

Localization for piR-57879 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-57879 Gene

Pathways & Interactions for piR-57879 Gene

PathCards logo

SuperPathways for piR-57879 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-57879 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-57879 Gene

Drugs & Compounds for piR-57879 Gene

No Compound Related Data Available

Transcripts for piR-57879 Gene

mRNA/cDNA for piR-57879 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-57879 Gene

No ASD Table

Relevant External Links for piR-57879 Gene

GeneLoc Exon Structure for
piR-57879

Expression for piR-57879 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-57879 Gene

Orthologs for piR-57879 Gene

No data available for Orthologs and Evolution for piR-57879 Gene

Paralogs for piR-57879 Gene

No data available for Paralogs for piR-57879 Gene

Variants for piR-57879 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-57879 Gene

Disorders for piR-57879 Gene

No disorders were found for piR-57879 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-57879 Gene

Publications for piR-57879 Gene

No publications were found for piR-57879 Gene.

No data available for External Links for piR-57879 Gene

Products for piR-57879 Gene

Sources for piR-57879 Gene