Aliases for piR-57133-372 Gene

Subcategory (RNA class) for piR-57133-372 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-57133-372 Gene

  • PiR-57133 161

Previous GeneCards Identifiers for piR-57133-372 Gene

  • GC20P049323
  • GC20P049341

No data available for External Ids for piR-57133-372 Gene

Summaries for piR-57133-372 Gene

GeneCards Summary for piR-57133-372 Gene

piR-57133-372 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-57133-372 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-57133-372 Gene

Genomics for piR-57133-372 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-57133-372 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J049297 Enhancer 0.6 Ensembl 600.7 -1.7 -1712 2.6 CREB1 PRDM10 YY1 SPI1 PRDM4 POLR2A MYC ZBTB40 ZNF362 SREBF1 piR-57133-372 CSE1L ZFAS1 SNORD12 ZNFX1 KCNB1
GH20J049275 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -17.3 -17308 14.3 CEBPG SP1 HNRNPL CREB1 GATAD2A ATF7 YBX1 PRDM10 ZNF629 REST ZNFX1 ZFAS1 SNORD12 DDX27 CSE1L SNORD12B B4GALT5 RNF114 ARFGEF2 PTGIS
GH20J049290 Enhancer 0.8 ENCODE 0.4 -9.1 -9142 1.3 IKZF1 NFKBIZ POLR2A PRDM1 HNRNPUL1 RBFOX2 REST ZNF600 SCRT2 HMBOX1 DDX27 CSE1L ZNFX1 SNORD12B SNORD12 piR-57133-372 ZFAS1 KCNB1
GH20J049302 Enhancer 0.5 Ensembl 0.7 +3.8 3788 1.6 PRDM1 RCOR1 FEZF1 ZNF146 PRDM6 ZNF791 GATA2 DDX27 ZFAS1 SNORD12B CSE1L piR-57133-372 lnc-DDX27-4 ZNFX1 KCNB1
GH20J049306 Enhancer 0.7 Ensembl 0.4 +7.3 7288 1 SOX13 ZHX2 PKNOX1 SMARCA5 CTBP1 ESRRA ZNF217 TEAD1 HCFC1 MBD2 ZFAS1 SNORD12 SNORD12B ZNFX1 SNORD12C CSE1L lnc-DDX27-4 piR-57133-372 KCNB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-57133-372 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-57133-372 Gene

Genomic Locations for piR-57133-372 Gene
chr20:49,299,813-49,299,841
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand

Genomic View for piR-57133-372 Gene

Genes around piR-57133-372 on UCSC Golden Path with GeneCards custom track
piR-57133-372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-57133-372 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-57133-372 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-57133-372 Gene

Proteins for piR-57133-372 Gene

Post-translational modifications for piR-57133-372 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-57133-372 Gene

Domains & Families for piR-57133-372 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-57133-372 Gene

Function for piR-57133-372 Gene

Phenotypes From GWAS Catalog for piR-57133-372 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-57133-372 Gene

Localization for piR-57133-372 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-57133-372 Gene

Pathways & Interactions for piR-57133-372 Gene

PathCards logo

SuperPathways for piR-57133-372 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-57133-372 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-57133-372 Gene

Drugs & Compounds for piR-57133-372 Gene

No Compound Related Data Available

Transcripts for piR-57133-372 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-57133-372 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005D34B8_9606 piRNA 29 1

ENA: DQ590021.1:1..29:ncRNA,

piR-57133-372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-57133-372 Gene

No ASD Table

Relevant External Links for piR-57133-372 Gene

GeneLoc Exon Structure for
piR-57133-372

No data available for mRNA/cDNA for piR-57133-372 Gene

Expression for piR-57133-372 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-57133-372 Gene

Orthologs for piR-57133-372 Gene

No data available for Orthologs and Evolution for piR-57133-372 Gene

Paralogs for piR-57133-372 Gene

No data available for Paralogs for piR-57133-372 Gene

Variants for piR-57133-372 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-57133-372 Gene

Disorders for piR-57133-372 Gene

No disorders were found for piR-57133-372 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-57133-372 Gene

Publications for piR-57133-372 Gene

No publications were found for piR-57133-372 Gene.

No data available for Mastermind for piR-57133-372 Gene

Products for piR-57133-372 Gene

Sources for piR-57133-372 Gene