Aliases for piR-56759-109 Gene

Subcategory (RNA class) for piR-56759-109 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-56759-109 Gene

  • PiR-56759 161

No data available for External Ids for piR-56759-109 Gene

Summaries for piR-56759-109 Gene

GeneCards Summary for piR-56759-109 Gene

piR-56759-109 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-56759-109 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-56759-109 Gene

Genomics for piR-56759-109 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-56759-109 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J026786 Enhancer 0.6 ENCODE 600.7 -0.8 -777 1.4 IKZF1 JUND FOS FOSL1 ZNF335 STAT1 TAL1 RXRA PRDM6 JUN piR-46662-112 piR-53431-120 piR-56759-109 piR-54764-107 piR-55650-110 piR-55650-111 ITPR2 LOC105369706 LOC101929091 BHLHE41
GH12J026791 Enhancer 0.8 FANTOM5 ENCODE 0.7 -5.0 -4975 0.7 IKZF2 EED ARID3A DPF2 RELB RUNX3 BCLAF1 IKZF1 JUNB PRDM4 STK38L C12orf71 piR-56759-109 LOC105369706 LOC101929091 ITPR2 BHLHE41
GH12J026797 Enhancer 0.8 Ensembl ENCODE 0.4 -12.7 -12664 3 IKZF2 PKNOX1 EED DPF2 RELB RUNX3 TCF12 RBM22 ARNT IKZF1 ENSG00000256640 LOC101929091 lnc-FGFR1OP2-4 ITPR2 piR-56759-109 LOC105369706 BHLHE41
GH12J026788 Enhancer 0.4 ENCODE 0.7 -2.4 -2362 0.5 JUND ZNF316 FOS MAFG ITPR2 piR-56759-109 LOC105369706 LOC101929091 BHLHE41
GH12J026792 Enhancer 0.2 FANTOM5 0.4 -5.9 -5948 0 C12orf71 ITPR2 LOC105369706 LOC101929091 piR-56759-109 BHLHE41
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-56759-109 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-56759-109 Gene

Genomic Locations for piR-56759-109 Gene
chr12:26,786,409-26,786,437
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand

Genomic View for piR-56759-109 Gene

Genes around piR-56759-109 on UCSC Golden Path with GeneCards custom track
piR-56759-109 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-56759-109 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-56759-109 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-56759-109 Gene

Proteins for piR-56759-109 Gene

Post-translational modifications for piR-56759-109 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-56759-109 Gene

Domains & Families for piR-56759-109 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-56759-109 Gene

Function for piR-56759-109 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-56759-109 Gene

Localization for piR-56759-109 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-56759-109 Gene

Pathways & Interactions for piR-56759-109 Gene

PathCards logo

SuperPathways for piR-56759-109 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-56759-109 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-56759-109 Gene

Drugs & Compounds for piR-56759-109 Gene

No Compound Related Data Available

Transcripts for piR-56759-109 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-56759-109 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005923D6_9606 piRNA 29 1

ENA: DQ589647.1:1..29:ncRNA,

piR-56759-109 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-56759-109 Gene

No ASD Table

Relevant External Links for piR-56759-109 Gene

GeneLoc Exon Structure for
piR-56759-109

No data available for mRNA/cDNA for piR-56759-109 Gene

Expression for piR-56759-109 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-56759-109 Gene

Orthologs for piR-56759-109 Gene

No data available for Orthologs and Evolution for piR-56759-109 Gene

Paralogs for piR-56759-109 Gene

No data available for Paralogs for piR-56759-109 Gene

Variants for piR-56759-109 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-56759-109 Gene

Disorders for piR-56759-109 Gene

No disorders were found for piR-56759-109 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-56759-109 Gene

Publications for piR-56759-109 Gene

No publications were found for piR-56759-109 Gene.

No data available for Mastermind for piR-56759-109 Gene

Products for piR-56759-109 Gene

Sources for piR-56759-109 Gene