Aliases for piR-56341-126 Gene

Subcategory (RNA class) for piR-56341-126 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-56341-126 Gene

  • PiR-56341 166

No data available for External Ids for piR-56341-126 Gene

Summaries for piR-56341-126 Gene

GeneCards Summary for piR-56341-126 Gene

piR-56341-126 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-56341-126 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-56341-126 Gene

Genomics for piR-56341-126 Gene

GeneHancer (GH) Regulatory Elements for piR-56341-126 Gene

Promoters and enhancers for piR-56341-126 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J223059 Enhancer 1 Ensembl ENCODE 750.6 -0.8 -799 1.4 SMARCE1 USF2 ZNF133 L3MBTL2 MNT TEAD4 MAFK BACH1 CBFA2T2 SMARCA4 piR-56341-126 ENSG00000234193 ACSL3 KCNE4 LOC105373905
GH02J223050 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 +4.4 4399 7.6 USF2 NR2F6 ZNF644 RFX1 PKNOX1 ZNF316 EP300 NR2C1 SCRT2 JUND ENSG00000234193 ACSL3 KCNE4 MRPL44 piR-56341-126
GH02J223099 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -42.0 -42017 3 CTCF CC2D1A L3MBTL2 RAD21 ZNF652 SP1 ZNF148 MLLT1 TRIM24 POLR2A KCNE4 LOC105373905 piR-56341-126
GH02J223075 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -17.6 -17594 1.9 ZNF548 FOS WDFY1 piR-56341-126 KCNE4 LOC105373905
GH02J223092 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 -34.4 -34399 1.4 RFX1 POLR2A ZNF335 JUND LOC105373905 piR-56341-126 KCNE4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-56341-126 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-56341-126 Gene

Genomic Locations for piR-56341-126 Gene
chr2:223,058,873-223,058,901
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand

Genomic View for piR-56341-126 Gene

Genes around piR-56341-126 on UCSC Golden Path with GeneCards custom track

piR-56341-126 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-56341-126 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-56341-126 Gene

Proteins for piR-56341-126 Gene

Post-translational modifications for piR-56341-126 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-56341-126 Gene

Domains & Families for piR-56341-126 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-56341-126 Gene

Function for piR-56341-126 Gene

Phenotypes From GWAS Catalog for piR-56341-126 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-56341-126 Gene

Localization for piR-56341-126 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-56341-126 Gene

Pathways & Interactions for piR-56341-126 Gene

PathCards logo

SuperPathways for piR-56341-126 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-56341-126 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-56341-126 Gene

Drugs & Compounds for piR-56341-126 Gene

No Compound Related Data Available

Transcripts for piR-56341-126 Gene

mRNA/cDNA for piR-56341-126 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-56341-126 Gene

No ASD Table

Relevant External Links for piR-56341-126 Gene

GeneLoc Exon Structure for
piR-56341-126

Expression for piR-56341-126 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-56341-126 Gene

Orthologs for piR-56341-126 Gene

No data available for Orthologs and Evolution for piR-56341-126 Gene

Paralogs for piR-56341-126 Gene

No data available for Paralogs for piR-56341-126 Gene

Variants for piR-56341-126 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-56341-126 Gene

Disorders for piR-56341-126 Gene

No disorders were found for piR-56341-126 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-56341-126 Gene

Publications for piR-56341-126 Gene

No publications were found for piR-56341-126 Gene.

No data available for External Links for piR-56341-126 Gene

Products for piR-56341-126 Gene

Sources for piR-56341-126 Gene