Aliases for piR-54384 Gene

Subcategory (RNA class) for piR-54384 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-54384 Gene

  • PiR-54384 166

No data available for External Ids for piR-54384 Gene

Summaries for piR-54384 Gene

GeneCards Summary for piR-54384 Gene

piR-54384 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-54384 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-54384 Gene

Genomics for piR-54384 Gene

GeneHancer (GH) Regulatory Elements for piR-54384 Gene

Promoters and enhancers for piR-54384 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J081595 Enhancer 0.2 dbSUPER 750.6 +1.2 1212 0.8 RF00017-2590 piR-54384 NPLOC4 TSPAN10
GH17J081596 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.6 -2.2 -2150 5.4 SP1 CTCF ETV6 RAD21 ZNF652 MLLT1 ZNF687 CREM PPARG SP5 TSPAN10 NPLOC4 ARL16 FAAP100 PDE6G CCDC137 OXLD1 TMEM105 piR-54384 lnc-PDE6G-3
GH17J081610 Enhancer 0.3 Ensembl ENCODE 0.4 -12.2 -12223 1.1 TSPAN10 lnc-PDE6G-3 piR-54384 NPLOC4
GH17J081607 Enhancer 0.3 ENCODE dbSUPER 0.4 -10.3 -10320 0.2 TSPAN10 NPLOC4 lnc-PDE6G-3 piR-54384
GH17J081603 Enhancer 0.2 dbSUPER 0.4 -7.2 -7152 1.2 NPLOC4 FAAP100 TSPAN10 PDE6G CCDC137 OXLD1 TMEM105 lnc-PDE6G-3 piR-54384
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-54384 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-54384 Gene

Genomic Locations for piR-54384 Gene
chr17:81,597,280-81,597,310
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-54384 Gene

Genes around piR-54384 on UCSC Golden Path with GeneCards custom track

piR-54384 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-54384 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-54384 Gene

Proteins for piR-54384 Gene

Post-translational modifications for piR-54384 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-54384 Gene

Domains & Families for piR-54384 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-54384 Gene

Function for piR-54384 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-54384 Gene

Localization for piR-54384 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-54384 Gene

Pathways & Interactions for piR-54384 Gene

PathCards logo

SuperPathways for piR-54384 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-54384 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-54384 Gene

Drugs & Compounds for piR-54384 Gene

No Compound Related Data Available

Transcripts for piR-54384 Gene

mRNA/cDNA for piR-54384 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-54384 Gene

No ASD Table

Relevant External Links for piR-54384 Gene

GeneLoc Exon Structure for
piR-54384

Expression for piR-54384 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-54384 Gene

Orthologs for piR-54384 Gene

No data available for Orthologs and Evolution for piR-54384 Gene

Paralogs for piR-54384 Gene

No data available for Paralogs for piR-54384 Gene

Variants for piR-54384 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-54384 Gene

Disorders for piR-54384 Gene

No disorders were found for piR-54384 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-54384 Gene

Publications for piR-54384 Gene

No publications were found for piR-54384 Gene.

No data available for External Links for piR-54384 Gene

Products for piR-54384 Gene

Sources for piR-54384 Gene