Aliases for piR-53864 Gene

Subcategory (RNA class) for piR-53864 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-53864 Gene

  • PiR-53864 164

No data available for External Ids for piR-53864 Gene

Summaries for piR-53864 Gene

GeneCards Summary for piR-53864 Gene

piR-53864 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-53864 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-53864 Gene

Genomics for piR-53864 Gene

GeneHancer (GH) Regulatory Elements for piR-53864 Gene

Promoters and enhancers for piR-53864 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J021974 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 500.7 +1.7 1663 4.4 MYC ZIC2 ZBTB10 ZNF423 ZBTB26 KLF7 ZBTB25 EP300 EZH2 HDAC2 CDKN2A GQ168815 piR-53864 CDKN2B MTAP UBA52P6 lnc-CDKN2B-3 ENSG00000264545
GH09J021977 Enhancer 0.4 dbSUPER 500.7 -1.6 -1589 0.7 ZFHX2 RNF2 EGR2 EZH2 piR-53864 MTAP CDKN2A CDKN2B-AS1 ENSG00000264545
GH09J021989 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -16.9 -16913 7.2 ZBTB40 ZSCAN5C SIN3A USF1 ZFX ZNF10 ZIC2 ZBTB10 ZNF623 ZNF423 CDKN2A CDKN2B-AS1 lnc-CDKN2B-2-001 lnc-CDKN2B-2-002 CDKN2A-DT CDKN2B MTAP ENSG00000266446 piR-53864 ENSG00000264545
GH09J021978 Enhancer 0.6 Ensembl dbSUPER 0.7 -3.3 -3337 0.4 ZNF189 EZH2 PRDM1 CDKN2B UBA52P6 MTAP piR-53864 CDKN2B-AS1 CDKN2A ENSG00000264545
GH09J021986 Enhancer 0.9 ENCODE dbSUPER 0.4 -11.3 -11281 2.3 ZSCAN5C ZNF10 MYNN ZBTB17 MAFF MAFK CEBPB USF1 RFX5 ZNF843 CDKN2B CDKN2A-DT UBA52P6 CDKN2A CDKN2B-AS1 piR-53864 ENSG00000264545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-53864 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-53864 Gene

Genomic Locations for piR-53864 Gene
chr9:21,976,233-21,976,264
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for piR-53864 Gene

Genes around piR-53864 on UCSC Golden Path with GeneCards custom track

piR-53864 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-53864 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-53864 Gene

Proteins for piR-53864 Gene

Post-translational modifications for piR-53864 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-53864 Gene

Domains & Families for piR-53864 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-53864 Gene

Function for piR-53864 Gene

Phenotypes From GWAS Catalog for piR-53864 Gene

miRNA for piR-53864 Gene

miRTarBase miRNAs that target piR-53864

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-53864 Gene

Localization for piR-53864 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-53864 Gene

Pathways & Interactions for piR-53864 Gene

PathCards logo

SuperPathways for piR-53864 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-53864 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-53864 Gene

Drugs & Compounds for piR-53864 Gene

No Compound Related Data Available

Transcripts for piR-53864 Gene

mRNA/cDNA for piR-53864 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-53864 Gene

No ASD Table

Relevant External Links for piR-53864 Gene

GeneLoc Exon Structure for
piR-53864

Expression for piR-53864 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-53864 Gene

Orthologs for piR-53864 Gene

No data available for Orthologs and Evolution for piR-53864 Gene

Paralogs for piR-53864 Gene

No data available for Paralogs for piR-53864 Gene

Variants for piR-53864 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-53864 Gene

Disorders for piR-53864 Gene

No disorders were found for piR-53864 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-53864 Gene

Publications for piR-53864 Gene

No publications were found for piR-53864 Gene.

No data available for Mastermind for piR-53864 Gene

Products for piR-53864 Gene

Sources for piR-53864 Gene