Aliases for piR-53514 Gene

Subcategory (RNA class) for piR-53514 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-53514 Gene

  • PiR-53514 164

No data available for External Ids for piR-53514 Gene

Summaries for piR-53514 Gene

GeneCards Summary for piR-53514 Gene

piR-53514 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-53514 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-53514 Gene

Genomics for piR-53514 Gene

GeneHancer (GH) Regulatory Elements for piR-53514 Gene

Promoters and enhancers for piR-53514 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J202275 Enhancer 0.6 ENCODE dbSUPER 500.7 +1.2 1241 1.2 FOS ZNF280D CEBPB STAT3 CEBPA SNORD70 SNORD70B piR-53514 NOP58
GH02J202264 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -8.4 -8351 5.2 EP300 FOXK2 ZBTB40 ZNF217 SIN3A TCF12 MYC USF1 POLR2G SP1 NOP58 NBEAL1 CYP20A1 ENSG00000228513 RPL12P16 ENSG00000213090 CDK15 ENSG00000273456 FAM117B ALS2
GH02J202269 Enhancer 0.8 ENCODE 0.4 -5.2 -5223 1 USF2 TOE1 MYC RAD51 ZBTB17 ZNF384 USF1 NKRF MAX ARNT ENSG00000273456 BMPR2 NOP58 piR-53514
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-53514 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-53514 Gene

Genomic Locations for piR-53514 Gene
chr2:202,275,152-202,275,180
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand

Genomic View for piR-53514 Gene

Genes around piR-53514 on UCSC Golden Path with GeneCards custom track

piR-53514 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-53514 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-53514 Gene

Proteins for piR-53514 Gene

Post-translational modifications for piR-53514 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-53514 Gene

Domains & Families for piR-53514 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-53514 Gene

Function for piR-53514 Gene

miRNA for piR-53514 Gene

miRTarBase miRNAs that target piR-53514

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-53514 Gene

Localization for piR-53514 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-53514 Gene

Pathways & Interactions for piR-53514 Gene

PathCards logo

SuperPathways for piR-53514 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-53514 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-53514 Gene

Drugs & Compounds for piR-53514 Gene

No Compound Related Data Available

Transcripts for piR-53514 Gene

mRNA/cDNA for piR-53514 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-53514 Gene

No ASD Table

Relevant External Links for piR-53514 Gene

GeneLoc Exon Structure for
piR-53514

Expression for piR-53514 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-53514 Gene

Orthologs for piR-53514 Gene

No data available for Orthologs and Evolution for piR-53514 Gene

Paralogs for piR-53514 Gene

No data available for Paralogs for piR-53514 Gene

Variants for piR-53514 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-53514 Gene

Disorders for piR-53514 Gene

No disorders were found for piR-53514 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-53514 Gene

Publications for piR-53514 Gene

No publications were found for piR-53514 Gene.

No data available for Mastermind for piR-53514 Gene

Products for piR-53514 Gene

Sources for piR-53514 Gene