Aliases for piR-53086 Gene

Subcategory (RNA class) for piR-53086 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-53086 Gene

  • PiR-53086 164

No data available for External Ids for piR-53086 Gene

Summaries for piR-53086 Gene

GeneCards Summary for piR-53086 Gene

piR-53086 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-53086 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-53086 Gene

Genomics for piR-53086 Gene

GeneHancer (GH) Regulatory Elements for piR-53086 Gene

Promoters and enhancers for piR-53086 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J049886 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 500.7 -0.7 -678 8.1 ZNF217 CTCF ZIC2 RFX1 REST ZBTB25 RAD21 TRIM22 ZKSCAN8 SMC3 piR-53086 piR-53639 SPATA2 RNF114 SLC9A8 DDX27 ENSG00000199490 RNU6-919P piR-30555
GH20J049896 Enhancer 0.7 dbSUPER 0.4 +5.2 5232 1.3 FOXA2 CEBPB ZBTB33 JUND SIX4 FOXA1 ZBTB1 RAD21 RXRA ZBTB7B RF00017-3622 SPATA2 ENSG00000199490 LINC01273 RNF114 RNU6-919P piR-53086
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-53086 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-53086 Gene

Genomic Locations for piR-53086 Gene
chr20:49,891,175-49,891,203
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand

Genomic View for piR-53086 Gene

Genes around piR-53086 on UCSC Golden Path with GeneCards custom track

piR-53086 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-53086 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-53086 Gene

Proteins for piR-53086 Gene

Post-translational modifications for piR-53086 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-53086 Gene

Domains & Families for piR-53086 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-53086 Gene

Function for piR-53086 Gene

Phenotypes From GWAS Catalog for piR-53086 Gene

miRNA for piR-53086 Gene

miRTarBase miRNAs that target piR-53086

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-53086 Gene

Localization for piR-53086 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-53086 Gene

Pathways & Interactions for piR-53086 Gene

PathCards logo

SuperPathways for piR-53086 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-53086 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-53086 Gene

Drugs & Compounds for piR-53086 Gene

No Compound Related Data Available

Transcripts for piR-53086 Gene

mRNA/cDNA for piR-53086 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-53086 Gene

No ASD Table

Relevant External Links for piR-53086 Gene

GeneLoc Exon Structure for
piR-53086

Expression for piR-53086 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-53086 Gene

Orthologs for piR-53086 Gene

No data available for Orthologs and Evolution for piR-53086 Gene

Paralogs for piR-53086 Gene

No data available for Paralogs for piR-53086 Gene

Variants for piR-53086 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-53086 Gene

Disorders for piR-53086 Gene

No disorders were found for piR-53086 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-53086 Gene

Publications for piR-53086 Gene

No publications were found for piR-53086 Gene.

No data available for Mastermind for piR-53086 Gene

Products for piR-53086 Gene

Sources for piR-53086 Gene