Aliases for piR-52233 Gene

Data sources for piR-52233 Gene:

RNA type for piR-52233 Gene

piRNA

Aliases for piR-52233 Gene

  • PiR-52233 (ENA)

No data available for External Ids for piR-52233 Gene

Summaries for piR-52233 Gene

GeneCards Summary for piR-52233 Gene

piR-52233 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-52233 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-52233 Gene

Genomics for piR-52233 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-52233 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J016222 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -1.1 -1128 6.5 MYC IKZF1 ATF2 CEBPA ATF3 POLR2A YY1 NONO SMAD5 SIN3A TAPT1 TAPT1-AS1 lnc-PROM1-4 piR-52233 piR-57491 PROM1 FGFBP2 piR-41306-198
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-52233 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-52233 Gene

Latest Assembly
chr4:16,227,091-16,227,120
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-52233 Gene

Genes around piR-52233 on UCSC Golden Path with GeneCards custom track
piR-52233 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-52233 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-52233 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-52233 Gene

Proteins for piR-52233 Gene

Post-translational modifications for piR-52233 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-52233 Gene

Domains & Families for piR-52233 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-52233 Gene

Function for piR-52233 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-52233 Gene

Localization for piR-52233 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-52233 Gene

Pathways & Interactions for piR-52233 Gene

PathCards logo

SuperPathways for piR-52233 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-52233 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-52233 Gene

Drugs & Compounds for piR-52233 Gene

No Compound Related Data Available

Transcripts for piR-52233 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-52233 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00001BF3C8_9606 piRNA 30 1

ENA: DQ585121.1:1..30:ncRNA,

piR-52233 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-52233 Gene

No ASD Table

Relevant External Links for piR-52233 Gene

GeneLoc Exon Structure for
piR-52233

No data available for mRNA/cDNA for piR-52233 Gene

Expression for piR-52233 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-52233 Gene

Orthologs for piR-52233 Gene

No data available for Orthologs and Evolution for piR-52233 Gene

Paralogs for piR-52233 Gene

No data available for Paralogs for piR-52233 Gene

Variants for piR-52233 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-52233 Gene

Disorders for piR-52233 Gene

No disorders were found for piR-52233 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-52233 Gene

Publications for piR-52233 Gene

No publications were found for piR-52233 Gene.

No data available for Mastermind for piR-52233 Gene

Products for piR-52233 Gene

Sources for piR-52233 Gene