piR-51624 Gene (RNA Gene)

 

GC16P011798
GIFtS:
4
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Aliases for piR-51624 Gene

Subcategory (RNA class) for piR-51624 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-51624 Gene

  • PiR-51624 161

No data available for External Ids for piR-51624 Gene

Summaries for piR-51624 Gene

GeneCards Summary for piR-51624 Gene

piR-51624 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-51624 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-51624 Gene

Genomics for piR-51624 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-51624 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J011790 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.5 -2532 10.1 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 REST TFE3 ZC3H7A ENSG00000277369 ENSG00000261560 ENSG00000263307 COX6CP1 TXNDC11 ENSG00000261216 HNRNPCP4 SOCS1 NPIPB2
GH16J011802 Enhancer 0.7 ENCODE dbSUPER 0.7 +3.2 3176 0.2 IKZF1 CTBP1 FOSL1 ZNF792 SAP130 ADNP NFYC ZC3H7A ENSG00000277369 piR-51624 piR-32214-238 RSL1D1
GH16J011809 Enhancer 1 ENCODE dbSUPER 0.4 +11.8 11840 1.7 GATAD2A ATF7 PRDM10 NFKBIZ FOXA1 PHF21A RXRB IRF2 IKZF2 POLR2A ZC3H7A ENSG00000261158 piR-32214-238 piR-51624 RSL1D1
GH16J011801 Enhancer 0.6 ENCODE dbSUPER 0.7 +2.8 2849 0.2 EGR1 FOSL1 ADNP ZBTB33 NFYC ENSG00000277369 ZC3H7A piR-51624 piR-32214-238 RSL1D1
GH16J011819 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +21.4 21367 1.6 JUND PKNOX1 BRD9 HDAC1 SOX6 MGA HMBOX1 ZNF10 FOXK2 HDAC2 ZC3H7A piR-32214-238 BCAR4 piR-51624 RSL1D1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-51624 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-51624 Gene

Genomic Locations for piR-51624 Gene
chr16:11,798,434-11,798,461
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand

Genomic View for piR-51624 Gene

Genes around piR-51624 on UCSC Golden Path with GeneCards custom track
piR-51624 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-51624 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-51624 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-51624 Gene

Proteins for piR-51624 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-51624 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-51624 Gene

Domains & Families for piR-51624 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-51624 Gene

Function for piR-51624 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-51624 Gene

Localization for piR-51624 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-51624 Gene

Pathways & Interactions for piR-51624 Gene

PathCards logo

SuperPathways for piR-51624 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-51624 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-51624 Gene

Drugs & Compounds for piR-51624 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-51624 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-51624 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000287B96_9606 piRNA 28 1

ENA: DQ584512.1:1..28:ncRNA,

piR-51624 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-51624 Gene

No ASD Table

Relevant External Links for piR-51624 Gene

GeneLoc Exon Structure for
piR-51624

No data available for mRNA/cDNA for piR-51624 Gene

Expression for piR-51624 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-51624 Gene

Orthologs for piR-51624 Gene

No data available for Orthologs and Evolution for piR-51624 Gene

Paralogs for piR-51624 Gene

No data available for Paralogs for piR-51624 Gene

Variants for piR-51624 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-51624 Gene

Disorders for piR-51624 Gene

No disorders were found for piR-51624 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-51624 Gene

Publications for piR-51624 Gene

No publications were found for piR-51624 Gene.

No data available for Mastermind for piR-51624 Gene

Products for piR-51624 Gene

Sources for piR-51624 Gene