Aliases for piR-50968-077 Gene

Subcategory (RNA class) for piR-50968-077 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-50968-077 Gene

No data available for External Ids for piR-50968-077 Gene

Summaries for piR-50968-077 Gene

GeneCards Summary for piR-50968-077 Gene

piR-50968-077 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-50968-077 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-50968-077 Gene

Genomics for piR-50968-077 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-50968-077 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J030634 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 -3.6 -3617 4.4 HNRNPL CTCF TEAD4 ZNF629 RFX1 ZNF692 FOXA1 LARP7 ZNF143 PHF21A SLC35E4 HSALNG0134910 TCN2 PES1 OSM SMTN CCDC157 TBC1D10A DUSP18 SF3A1
GH22J030648 Enhancer 0.9 Ensembl ENCODE 0.4 +10.0 9966 3.2 PRDM10 KDM1A JUND ZIC2 PKNOX1 EED NRF1 MGA SMARCC1 EGR1 TCN2 PES1 ENSG00000223831 SLC35E4 ENSG00000250318 lnc-PES1-1 piR-50968-077 DUSP18
GH22J030643 Enhancer 0.3 ENCODE 0.7 +4.2 4189 1.2 ZBTB17 EBF1 SLC35E4 OSBP2 piR-50968-077 ENSG00000250318 lnc-PES1-1 DUSP18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-50968-077 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-50968-077 Gene

Genomic Locations for piR-50968-077 Gene
chr22:30,639,835-30,639,866
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand

Genomic View for piR-50968-077 Gene

Genes around piR-50968-077 on UCSC Golden Path with GeneCards custom track
piR-50968-077 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-50968-077 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-50968-077 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-50968-077 Gene

Proteins for piR-50968-077 Gene

Post-translational modifications for piR-50968-077 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-50968-077 Gene

Domains & Families for piR-50968-077 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-50968-077 Gene

Function for piR-50968-077 Gene

Phenotypes From GWAS Catalog for piR-50968-077 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-50968-077 Gene

Localization for piR-50968-077 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-50968-077 Gene

Pathways & Interactions for piR-50968-077 Gene

PathCards logo

SuperPathways for piR-50968-077 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-50968-077 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-50968-077 Gene

Drugs & Compounds for piR-50968-077 Gene

No Compound Related Data Available

Transcripts for piR-50968-077 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-50968-077 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000BC188_9606 piRNA 30 1

ENA: DQ583856.1:1..30:ncRNA,

URS0000488DF9_9606 piRNA 29 1

ENA: DQ591678.1:1..29:ncRNA,

piR-50968-077 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-50968-077 Gene

No ASD Table

Relevant External Links for piR-50968-077 Gene

GeneLoc Exon Structure for
piR-50968-077

No data available for mRNA/cDNA for piR-50968-077 Gene

Expression for piR-50968-077 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-50968-077 Gene

Orthologs for piR-50968-077 Gene

No data available for Orthologs and Evolution for piR-50968-077 Gene

Paralogs for piR-50968-077 Gene

No data available for Paralogs for piR-50968-077 Gene

Variants for piR-50968-077 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-50968-077 Gene

Disorders for piR-50968-077 Gene

No disorders were found for piR-50968-077 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-50968-077 Gene

Publications for piR-50968-077 Gene

No publications were found for piR-50968-077 Gene.

No data available for Mastermind for piR-50968-077 Gene

Products for piR-50968-077 Gene

Sources for piR-50968-077 Gene