Aliases for piR-50968-055 Gene

Data sources for piR-50968-055 Gene:

Subcategory (RNA class) for piR-50968-055 Gene

piRNA

Aliases for piR-50968-055 Gene

  • PiR-58790 (ENA)
  • PiR-50968 (ENA)

No data available for External Ids for piR-50968-055 Gene

Summaries for piR-50968-055 Gene

GeneCards Summary for piR-50968-055 Gene

piR-50968-055 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-50968-055 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-50968-055 Gene

Genomics for piR-50968-055 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-50968-055 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J073562 Enhancer 0.6 Ensembl ENCODE 0.3 +46.0 46042 2.9 STAT3 MAFK BHLHE40 NFE2L2 FOS NETO1 HSALNG0122403 piR-50968-055 lnc-FBXO15-3 FBXO15
GH18J073462 Enhancer 0.7 Ensembl ENCODE 0.2 -55.9 -55946 1.2 RXRA FOXA2 HNF4A EGR1 POLR2A CEBPB SP1 MN309174-313 piR-50968-055 lnc-FBXO15-3 FBXO15 NETO1
GH18J073511 Enhancer 0.3 ENCODE 0.4 -5.8 -5786 0.2 CEBPB piR-50968-055 HSALNG0122403 MN309174-313 lnc-FBXO15-3 NETO1 FBXO15
GH18J073522 Enhancer 0.2 Ensembl 0.4 +5.2 5154 0.2 piR-50968-055 HSALNG0122403 lnc-FBXO15-3 NETO1 FBXO15
GH18J073512 Enhancer 0.2 ENCODE 0.4 -5.5 -5505 0.4 NETO1 piR-50968-055 HSALNG0122403 MN309174-313 lnc-FBXO15-3 FBXO15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-50968-055 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-50968-055 Gene

Latest Assembly
chr18:73,517,747-73,517,778
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand

Genomic View for piR-50968-055 Gene

Genes around piR-50968-055 on UCSC Golden Path with GeneCards custom track
piR-50968-055 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-50968-055 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-50968-055 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-50968-055 Gene

Proteins for piR-50968-055 Gene

Post-translational modifications for piR-50968-055 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-50968-055 Gene

Domains & Families for piR-50968-055 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-50968-055 Gene

Function for piR-50968-055 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-50968-055 Gene

Localization for piR-50968-055 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-50968-055 Gene

Pathways & Interactions for piR-50968-055 Gene

PathCards logo

SuperPathways for piR-50968-055 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-50968-055 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-50968-055 Gene

Drugs & Compounds for piR-50968-055 Gene

No Compound Related Data Available

Transcripts for piR-50968-055 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-50968-055 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000BC188_9606 piRNA 30 1

ENA: DQ583856.1:1..30:ncRNA,

URS0000488DF9_9606 piRNA 29 1

ENA: DQ591678.1:1..29:ncRNA,

piR-50968-055 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-50968-055 Gene

No ASD Table

Relevant External Links for piR-50968-055 Gene

GeneLoc Exon Structure for
piR-50968-055

No data available for mRNA/cDNA for piR-50968-055 Gene

Expression for piR-50968-055 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-50968-055 Gene

Orthologs for piR-50968-055 Gene

No data available for Orthologs and Evolution for piR-50968-055 Gene

Paralogs for piR-50968-055 Gene

No data available for Paralogs for piR-50968-055 Gene

Variants for piR-50968-055 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-50968-055 Gene

Disorders for piR-50968-055 Gene

No disorders were found for piR-50968-055 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-50968-055 Gene

Publications for piR-50968-055 Gene

No publications were found for piR-50968-055 Gene.

No data available for Mastermind for piR-50968-055 Gene

Products for piR-50968-055 Gene

Sources for piR-50968-055 Gene