piR-50444-037 Gene (RNA Gene)

 

GC10P012686
GIFtS:
2
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Aliases for piR-50444-037 Gene

Data sources for piR-50444-037 Gene:

Subcategory (RNA class) for piR-50444-037 Gene

piRNA

Aliases for piR-50444-037 Gene

  • PiR-50444 (ENA)

No data available for External Ids for piR-50444-037 Gene

Summaries for piR-50444-037 Gene

GeneCards Summary for piR-50444-037 Gene

piR-50444-037 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-50444-037 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-50444-037 Gene

Genomics for piR-50444-037 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-50444-037 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J012685 Enhancer 0.4 Ensembl 250.7 -1.0 -973 0.4 JUND RFX5 POLR2A EP300 piR-50444-037 piR-50443-035 CAMK1D OPTN
GH10J012690 Enhancer 0.7 Ensembl ENCODE 0.7 +4.3 4265 1.3 FEZF1 FOXA2 RXRA FOXA1 HNF4A MAX L3MBTL2 PKNOX1 NR2C2 NR2F2 piR-50444-037 MIR548Q CAMK1D OPTN
GH10J012705 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas 0.3 +22.3 22304 6.3 FEZF1 CTCF ZIC2 CEBPB ZNF513 REST ZNF395 NBN IRF4 TRIM22 CAMK1D CCDC3 OPTN ENSG00000239665 MIR548Q piR-50444-037
GH10J012698 Enhancer 0.9 Ensembl ENCODE 0.4 +13.4 13410 2 FOXA2 SMAD4 RXRA RARA TEAD3 ZBTB33 BCL6 ZNF205 JUND HNF4A MIR548Q OPTN CCDC3 piR-50444-037 CAMK1D
GH10J012717 Enhancer 1 ENCODE 0.3 +33.3 33275 3.6 ZSCAN16 FEZF1 CEBPA ZNF217 HES1 CTCF BRCA1 ZEB1 ZNF610 CEBPB CAMK1D OPTN CCDC3 MIR548Q piR-50444-037
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-50444-037 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-50444-037 Gene

Latest Assembly
chr10:12,686,374-12,686,401
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand

Genomic View for piR-50444-037 Gene

Genes around piR-50444-037 on UCSC Golden Path with GeneCards custom track
piR-50444-037 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-50444-037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-50444-037 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-50444-037 Gene

Proteins for piR-50444-037 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for piR-50444-037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-50444-037 Gene

Domains & Families for piR-50444-037 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-50444-037 Gene

Function for piR-50444-037 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-50444-037 Gene

Localization for piR-50444-037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-50444-037 Gene

Pathways & Interactions for piR-50444-037 Gene

PathCards logo

SuperPathways for piR-50444-037 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-50444-037 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-50444-037 Gene

Drugs & Compounds for piR-50444-037 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for piR-50444-037 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-50444-037 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000118350_9606 piRNA 28 1

ENA: DQ583332.1:1..28:ncRNA,

piR-50444-037 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-50444-037 Gene

No ASD Table

Relevant External Links for piR-50444-037 Gene

GeneLoc Exon Structure for
piR-50444-037

No data available for mRNA/cDNA for piR-50444-037 Gene

Expression for piR-50444-037 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-50444-037 Gene

Orthologs for piR-50444-037 Gene

No data available for Orthologs and Evolution for piR-50444-037 Gene

Paralogs for piR-50444-037 Gene

No data available for Paralogs for piR-50444-037 Gene

Variants for piR-50444-037 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-50444-037 Gene

Disorders for piR-50444-037 Gene

No disorders were found for piR-50444-037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-50444-037 Gene

Publications for piR-50444-037 Gene

No publications were found for piR-50444-037 Gene.

No data available for Mastermind for piR-50444-037 Gene

Products for piR-50444-037 Gene

Sources for piR-50444-037 Gene