Aliases for piR-50443-186 Gene

Data sources for piR-50443-186 Gene:

RNA type for piR-50443-186 Gene

piRNA

Aliases for piR-50443-186 Gene

  • PiR-50443 (ENA)

No data available for External Ids for piR-50443-186 Gene

Summaries for piR-50443-186 Gene

GeneCards Summary for piR-50443-186 Gene

piR-50443-186 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-50443-186 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-50443-186 Gene

Genomics for piR-50443-186 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-50443-186 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J056650 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 -37.5 -37487 3.6 IKZF1 ZNF600 SIX5 POLR2A CEBPA ZNF10 ZIC2 ZBTB10 YY1 NONO TXNL1 HSALNG0121734 WDR7 lnc-FECH-3 ENSG00000201816 piR-50443-186 BOD1L2
GH18J056709 Enhancer 0.7 ENCODE 0.4 +20.3 20272 0.2 JUND TRIM22 CTCF RAD21 RFX5 SMC3 IRF4 FOSL2 BATF CHAMP1 HSALNG0121736 piR-50443-186 TXNL1 WDR7 BOD1L2
GH18J056702 Enhancer 0.5 Ensembl 0.4 +14.0 14048 0.9 ZNF654 CTCF RAD21 SMC3 USF2 RAD51 CREB1 CREM piR-50443-186 HSALNG0121736 TXNL1 WDR7 BOD1L2
GH18J056660 Enhancer 0.6 FANTOM5 Ensembl 0.3 -28.7 -28672 2.1 FEZF1 SCRT1 NR2F6 PRDM1 TXNL1 HSALNG0121734 WDR7 piR-50443-186 BOD1L2
GH18J056717 Enhancer 0.6 FANTOM5 0.3 +27.8 27821 0.2 BATF IKZF1 TCF7 MTA3 JUNB MTA2 IKZF2 NBN DPF2 RUNX3 HSALNG0121736 piR-50443-186 TXNL1 WDR7 BOD1L2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-50443-186 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-50443-186 Gene

Latest Assembly
chr18:56,689,313-56,689,345
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand

Genomic View for piR-50443-186 Gene

Genes around piR-50443-186 on UCSC Golden Path with GeneCards custom track
piR-50443-186 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-50443-186 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-50443-186 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-50443-186 Gene

Proteins for piR-50443-186 Gene

Post-translational modifications for piR-50443-186 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-50443-186 Gene

Domains & Families for piR-50443-186 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-50443-186 Gene

Function for piR-50443-186 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-50443-186 Gene

Localization for piR-50443-186 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-50443-186 Gene

Pathways & Interactions for piR-50443-186 Gene

PathCards logo

SuperPathways for piR-50443-186 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-50443-186 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-50443-186 Gene

Drugs & Compounds for piR-50443-186 Gene

No Compound Related Data Available

Transcripts for piR-50443-186 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-50443-186 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000046AD01_9606 piRNA 31 1

ENA: DQ583331.1:1..31:ncRNA,

piR-50443-186 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-50443-186 Gene

No ASD Table

Relevant External Links for piR-50443-186 Gene

GeneLoc Exon Structure for
piR-50443-186

No data available for mRNA/cDNA for piR-50443-186 Gene

Expression for piR-50443-186 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-50443-186 Gene

Orthologs for piR-50443-186 Gene

No data available for Orthologs and Evolution for piR-50443-186 Gene

Paralogs for piR-50443-186 Gene

No data available for Paralogs for piR-50443-186 Gene

Variants for piR-50443-186 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-50443-186 Gene

Disorders for piR-50443-186 Gene

No disorders were found for piR-50443-186 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-50443-186 Gene

Publications for piR-50443-186 Gene

No publications were found for piR-50443-186 Gene.

No data available for Mastermind for piR-50443-186 Gene

Products for piR-50443-186 Gene

Sources for piR-50443-186 Gene