Aliases for piR-50408-008 Gene

Subcategory (RNA class) for piR-50408-008 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-50408-008 Gene

No data available for External Ids for piR-50408-008 Gene

Summaries for piR-50408-008 Gene

GeneCards Summary for piR-50408-008 Gene

piR-50408-008 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-50408-008 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-50408-008 Gene

Genomics for piR-50408-008 Gene

GeneHancer (GH) Regulatory Elements for piR-50408-008 Gene

Promoters and enhancers for piR-50408-008 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J086066 Enhancer 0.6 Ensembl 750.6 +0.2 249 1.6 MAFK IKZF1 ZIC2 NFE2L2 ZNF316 NFE2 MAFG NR2C2 NFIC ZFHX2 piR-41141-010 piR-50408-008 piR-35674-202 lnc-IRF8-7
GH16J086065 Enhancer 0.4 Ensembl 750.6 +1.7 1749 0.2 SCRT2 SCRT1 CTCF piR-41141-010 piR-50408-008 piR-35674-202 lnc-IRF8-7
GH16J086067 Enhancer 0.2 Ensembl 750.6 -1.1 -1051 0.6 piR-41141-010 piR-50408-008 lnc-IRF8-7 ENSG00000261177
GH16J086059 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.4 +5.2 5152 4.2 MTA3 IKZF1 NR2F2 ZFHX2 piR-35674-202 lnc-IRF8-7 piR-50408-008 LOC105376778
GH16J086064 Enhancer 0.2 Ensembl 0.6 +2.1 2149 0.2 piR-50408-008 piR-35674-202 lnc-IRF8-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-50408-008 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-50408-008 Gene

Genomic Locations for piR-50408-008 Gene
chr16:86,066,624-86,066,650
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand

Genomic View for piR-50408-008 Gene

Genes around piR-50408-008 on UCSC Golden Path with GeneCards custom track

piR-50408-008 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-50408-008 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-50408-008 Gene

Proteins for piR-50408-008 Gene

Post-translational modifications for piR-50408-008 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-50408-008 Gene

Domains & Families for piR-50408-008 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-50408-008 Gene

Function for piR-50408-008 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-50408-008 Gene

Localization for piR-50408-008 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-50408-008 Gene

Pathways & Interactions for piR-50408-008 Gene

PathCards logo

SuperPathways for piR-50408-008 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-50408-008 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-50408-008 Gene

Drugs & Compounds for piR-50408-008 Gene

No Compound Related Data Available

Transcripts for piR-50408-008 Gene

mRNA/cDNA for piR-50408-008 Gene

(2) RNACentral transcripts :
(2) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-50408-008 Gene

No ASD Table

Relevant External Links for piR-50408-008 Gene

GeneLoc Exon Structure for
piR-50408-008

Expression for piR-50408-008 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-50408-008 Gene

Orthologs for piR-50408-008 Gene

No data available for Orthologs and Evolution for piR-50408-008 Gene

Paralogs for piR-50408-008 Gene

No data available for Paralogs for piR-50408-008 Gene

Variants for piR-50408-008 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-50408-008 Gene

Disorders for piR-50408-008 Gene

No disorders were found for piR-50408-008 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-50408-008 Gene

Publications for piR-50408-008 Gene

No publications were found for piR-50408-008 Gene.

No data available for External Links for piR-50408-008 Gene

Products for piR-50408-008 Gene

Sources for piR-50408-008 Gene