Aliases for piR-49402 Gene

Subcategory (RNA class) for piR-49402 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-49402 Gene

  • PiR-49402 164

No data available for External Ids for piR-49402 Gene

Summaries for piR-49402 Gene

GeneCards Summary for piR-49402 Gene

piR-49402 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-49402 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-49402 Gene

Genomics for piR-49402 Gene

GeneHancer (GH) Regulatory Elements for piR-49402 Gene

Promoters and enhancers for piR-49402 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J000585 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 -1.8 -1848 4 CTCF ELF1 GATA3 TAL1 RAD21 TEAD4 ZNF24 SMC3 TRIM22 MNT piR-49402 ENSG00000225140 DIP2C ENSG00000233021 TUBB8 LOC101930421
GH10J000580 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +4.0 3983 2.5 FOS JUND RAD21 CHD1 ZNF121 CEBPB STAT3 ENSG00000225140 DIP2C TUBB8 piR-49402 HSALNG0075491
GH10J000593 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -8.6 -8607 1.3 FOS ZBTB17 NFE2 ZBTB48 RXRA HNF4A BHLHE40 YY1 ZNF24 NFE2L2 PRR26 DIP2C piR-49402 LOC101930421
GH10J000571 Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +13.8 13752 2.8 RFX1 GATA3 E2F1 PKNOX1 FOXA1 CEBPB PCBP2 piR-49402 HSALNG0075491 DIP2C
GH10J000546 Enhancer 1.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +38.2 38152 2.8 ZNF217 ZIC2 CUX1 GATAD2B CTBP1 MXI1 ZNF341 SIN3A ESRRA ELK1 DIP2C IDI1 TUBB8 piR-49402 HSALNG0075491
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-49402 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-49402 Gene

Genomic Locations for piR-49402 Gene
chr10:585,523-585,553
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-49402 Gene

Genes around piR-49402 on UCSC Golden Path with GeneCards custom track

piR-49402 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-49402 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-49402 Gene

Proteins for piR-49402 Gene

Post-translational modifications for piR-49402 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-49402 Gene

Domains & Families for piR-49402 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-49402 Gene

Function for piR-49402 Gene

Phenotypes From GWAS Catalog for piR-49402 Gene

miRNA for piR-49402 Gene

miRTarBase miRNAs that target piR-49402

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-49402 Gene

Localization for piR-49402 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-49402 Gene

Pathways & Interactions for piR-49402 Gene

PathCards logo

SuperPathways for piR-49402 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-49402 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-49402 Gene

Drugs & Compounds for piR-49402 Gene

No Compound Related Data Available

Transcripts for piR-49402 Gene

mRNA/cDNA for piR-49402 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-49402 Gene

No ASD Table

Relevant External Links for piR-49402 Gene

GeneLoc Exon Structure for
piR-49402

Expression for piR-49402 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-49402 Gene

Orthologs for piR-49402 Gene

No data available for Orthologs and Evolution for piR-49402 Gene

Paralogs for piR-49402 Gene

No data available for Paralogs for piR-49402 Gene

Variants for piR-49402 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-49402 Gene

Disorders for piR-49402 Gene

No disorders were found for piR-49402 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-49402 Gene

Publications for piR-49402 Gene

No publications were found for piR-49402 Gene.

No data available for Mastermind for piR-49402 Gene

Products for piR-49402 Gene

Sources for piR-49402 Gene