piR-47698 Gene (RNA Gene)

 

GC01P109632
GIFtS:
3
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Aliases for piR-47698 Gene

Data sources for piR-47698 Gene:

Subcategory (RNA class) for piR-47698 Gene

piRNA

Aliases for piR-47698 Gene

  • PiR-47698 (ENA)

No data available for External Ids for piR-47698 Gene

Summaries for piR-47698 Gene

GeneCards Summary for piR-47698 Gene

piR-47698 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-47698 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-47698 Gene

Genomics for piR-47698 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-47698 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J109631 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 250.7 +1.4 1352 2.1 POLR2A ZIC2 ZNF341 ZNF189 ZNF664 GLIS1 RCOR1 ZNF398 SP7 EGR2 piR-47698 GSTM4 HSALNG0005910 GNAT2 AMPD2 RPL7P8
GH01J109634 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.5 4465 3.3 ZBTB10 CEBPA IKZF1 ZIC2 CEBPB MAX MAFF SAP130 EP300 EBF1 GSTM4 GSTM5 GSTM3 GSTM2 GSTM1 piR-47698 HSALNG0005910 GNAT2 RPL7P8
GH01J109640 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +10.8 10805 5.6 ZBTB10 DEK ZNF217 CTCF BHLHE40 ZEB1 NONO ZIC2 ARNT REST GSTM4 GSTM3 GNAT2 AMPD2 GNAI3 MIR197 ENSG00000225113 RNU6V GSTM2 GSTM1
GH01J109633 Enhancer 0.4 ENCODE dbSUPER 0.7 +2.6 2618 0.2 BHLHE40 HSALNG0005910 piR-47698 GNAT2 RPL7P8 GSTM4
GH01J109649 Enhancer 0.7 Ensembl ENCODE 0.4 +18.5 18495 1 IRF2 CTCF NUFIP1 NFYC RAD21 ZNF561 POLR2A SMC3 ZNF654 ZNF10 RPL7P8 lnc-GSTM4-3 ENSG00000254942 GPR61 GNAI3 GNAT2 AMPD2 AHCYL1 EPS8L3 GSTM3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-47698 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-47698 Gene

Latest Assembly
chr1:109,630,996-109,631,025
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-47698 Gene

Genes around piR-47698 on UCSC Golden Path with GeneCards custom track
piR-47698 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-47698 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-47698 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-47698 Gene

Proteins for piR-47698 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for piR-47698 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-47698 Gene

Domains & Families for piR-47698 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-47698 Gene

Function for piR-47698 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-47698 Gene

Localization for piR-47698 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-47698 Gene

Pathways & Interactions for piR-47698 Gene

PathCards logo

SuperPathways for piR-47698 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-47698 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-47698 Gene

Drugs & Compounds for piR-47698 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for piR-47698 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-47698 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004D61B4_9606 piRNA 30 1

ENA: DQ579586.1:1..30:ncRNA,

piR-47698 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-47698 Gene

No ASD Table

Relevant External Links for piR-47698 Gene

GeneLoc Exon Structure for
piR-47698

No data available for mRNA/cDNA for piR-47698 Gene

Expression for piR-47698 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-47698 Gene

Orthologs for piR-47698 Gene

No data available for Orthologs and Evolution for piR-47698 Gene

Paralogs for piR-47698 Gene

No data available for Paralogs for piR-47698 Gene

Variants for piR-47698 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-47698 Gene

Disorders for piR-47698 Gene

No disorders were found for piR-47698 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-47698 Gene

Publications for piR-47698 Gene

No publications were found for piR-47698 Gene.

No data available for Mastermind for piR-47698 Gene

Products for piR-47698 Gene

Sources for piR-47698 Gene