Aliases for piR-47211-634 Gene

Data sources for piR-47211-634 Gene:

Subcategory (RNA class) for piR-47211-634 Gene

piRNA

Aliases for piR-47211-634 Gene

  • PiR-47211 (ENA)

No data available for External Ids for piR-47211-634 Gene

Summaries for piR-47211-634 Gene

GeneCards Summary for piR-47211-634 Gene

piR-47211-634 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-47211-634 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-47211-634 Gene

Genomics for piR-47211-634 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-47211-634 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J019939 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.3 -6265 4 TBP ZIC2 CEBPB ZNF341 SP2 ZNF316 KLF16 ZNF2 POLR2A MAFK LPL lnc-CSGALNACT1-2 piR-47211-634 SLC18A1
GH08J019937 Enhancer 0.8 ENCODE dbSUPER 0.7 -3.8 -3789 0.2 BHLHE40 CEBPB MAX USF2 ZNF318 NRF1 ZNF384 L3MBTL2 SP1 MITF lnc-CSGALNACT1-2 piR-47211-634 LPL SLC18A1
GH08J019928 Enhancer 0.7 Ensembl dbSUPER 0.7 +4.3 4336 2.8 CTCF CEBPB REST SMC3 RAD21 ZNF316 BATF MAFK MAFF ARID3A piR-47211-634 lnc-CSGALNACT1-2 piR-59297-633 LPL SLC18A1
GH08J019923 Enhancer 0.2 dbSUPER 0.4 +8.6 8592 2.7 ENSG00000253775 piR-47211-634 piR-59297-633 lnc-CSGALNACT1-2 LPL SLC18A1
GH08J019915 Enhancer 0.2 Ensembl 0.4 +17.3 17335 0.4 piR-59297-633 LPL LOC107986921 piR-47211-634 lnc-CSGALNACT1-2 SLC18A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-47211-634 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-47211-634 Gene

Latest Assembly
chr8:19,933,307-19,933,336
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-47211-634 Gene

Genes around piR-47211-634 on UCSC Golden Path with GeneCards custom track
piR-47211-634 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-47211-634 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-47211-634 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-47211-634 Gene

Proteins for piR-47211-634 Gene

Post-translational modifications for piR-47211-634 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-47211-634 Gene

Domains & Families for piR-47211-634 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-47211-634 Gene

Function for piR-47211-634 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-47211-634 Gene

Localization for piR-47211-634 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-47211-634 Gene

Pathways & Interactions for piR-47211-634 Gene

PathCards logo

SuperPathways for piR-47211-634 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-47211-634 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-47211-634 Gene

Drugs & Compounds for piR-47211-634 Gene

No Compound Related Data Available

Transcripts for piR-47211-634 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-47211-634 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000046C51C_9606 piRNA 30 1

ENA: DQ579099.1:1..30:ncRNA,

piR-47211-634 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-47211-634 Gene

No ASD Table

Relevant External Links for piR-47211-634 Gene

GeneLoc Exon Structure for
piR-47211-634

No data available for mRNA/cDNA for piR-47211-634 Gene

Expression for piR-47211-634 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-47211-634 Gene

Orthologs for piR-47211-634 Gene

No data available for Orthologs and Evolution for piR-47211-634 Gene

Paralogs for piR-47211-634 Gene

No data available for Paralogs for piR-47211-634 Gene

Variants for piR-47211-634 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-47211-634 Gene

Disorders for piR-47211-634 Gene

No disorders were found for piR-47211-634 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-47211-634 Gene

Publications for piR-47211-634 Gene

No publications were found for piR-47211-634 Gene.

No data available for Mastermind for piR-47211-634 Gene

Products for piR-47211-634 Gene

Sources for piR-47211-634 Gene