Aliases for piR-46939 Gene

Subcategory (RNA class) for piR-46939 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-46939 Gene

  • PiR-46939 166

No data available for External Ids for piR-46939 Gene

Summaries for piR-46939 Gene

GeneCards Summary for piR-46939 Gene

piR-46939 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-46939 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-46939 Gene

Genomics for piR-46939 Gene

GeneHancer (GH) Regulatory Elements for piR-46939 Gene

Promoters and enhancers for piR-46939 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J025140 Enhancer 0.2 Ensembl 750.6 +1.0 966 0.2 piR-46939 piR-45035-110 EFR3B
GH02J025128 Enhancer 0.8 FANTOM5 ENCODE 0.4 -9.6 -9614 0.7 SIN3A CTCF ZNF362 RAD21 ZNF384 EGR1 ZNF692 MCM7 YBX1 MAZ ASXL2 ENSG00000271936 POMC EFR3B RPS2P15 DNMT3A DNAJC27 piR-46939 piR-43105-341
GH02J025105 Enhancer 0.8 Ensembl ENCODE 0.3 -33.5 -33493 1.7 MAFK FOSL2 POLR2A SOX13 NFE2L2 REST JUND SP1 RFX1 FOS piR-43105-341 ENSG00000202479 ENSG00000237953 DNAJC27 DNAJC27-AS1 POMC ADCY3 piR-46939 EFR3B
GH02J025131 Enhancer 0.4 ENCODE 0.4 -6.9 -6853 1.8 IKZF1 NRF1 SIN3A piR-46939 piR-43105-341 EFR3B
GH02J025115 Enhancer 0.4 Ensembl 0.3 -23.2 -23234 0.2 REST EHMT2 FOXA2 MIER2 POMC EFR3B LINC01381 ENSG00000202479 ENSG00000237953 DNAJC27 DNAJC27-AS1 piR-43105-341 piR-46939
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-46939 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-46939 Gene

Genomic Locations for piR-46939 Gene
chr2:25,139,135-25,139,164
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-46939 Gene

Genes around piR-46939 on UCSC Golden Path with GeneCards custom track

piR-46939 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-46939 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-46939 Gene

Proteins for piR-46939 Gene

Post-translational modifications for piR-46939 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-46939 Gene

Domains & Families for piR-46939 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-46939 Gene

Function for piR-46939 Gene

Phenotypes From GWAS Catalog for piR-46939 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-46939 Gene

Localization for piR-46939 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-46939 Gene

Pathways & Interactions for piR-46939 Gene

PathCards logo

SuperPathways for piR-46939 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-46939 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-46939 Gene

Drugs & Compounds for piR-46939 Gene

No Compound Related Data Available

Transcripts for piR-46939 Gene

mRNA/cDNA for piR-46939 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-46939 Gene

No ASD Table

Relevant External Links for piR-46939 Gene

GeneLoc Exon Structure for
piR-46939

Expression for piR-46939 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-46939 Gene

Orthologs for piR-46939 Gene

No data available for Orthologs and Evolution for piR-46939 Gene

Paralogs for piR-46939 Gene

No data available for Paralogs for piR-46939 Gene

Variants for piR-46939 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-46939 Gene

Disorders for piR-46939 Gene

No disorders were found for piR-46939 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-46939 Gene

Publications for piR-46939 Gene

No publications were found for piR-46939 Gene.

No data available for External Links for piR-46939 Gene

Products for piR-46939 Gene

Sources for piR-46939 Gene