piR-46824-006 Gene (RNA Gene)

 

GC16M030446
GIFtS:
1
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Aliases for piR-46824-006 Gene

Subcategory (RNA class) for piR-46824-006 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-46824-006 Gene

  • PiR-46824 161

Previous GeneCards Identifiers for piR-46824-006 Gene

  • GC16M030281
  • GC16M030349

No data available for External Ids for piR-46824-006 Gene

Summaries for piR-46824-006 Gene

GeneCards Summary for piR-46824-006 Gene

piR-46824-006 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-46824-006 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-46824-006 Gene

Genomics for piR-46824-006 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-46824-006 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J030270 Enhancer 0.2 Ensembl 600.7 +1.0 1020 0.2 piR-46824-006 lnc-NPIPB13-2 NPIPB13 SMG1P5 CD2BP2
GH16J030275 Enhancer 0.3 Ensembl 0.7 -4.3 -4263 0.8 HNF4A piR-34267-002 piR-46824-006 NPIPB13 SMG1P5 CD2BP2
GH16J030276 Enhancer 0.2 Ensembl 0.7 -5.0 -4980 0.2 piR-34267-002 piR-46824-006 NPIPB13 SMG1P5 CD2BP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-46824-006 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-46824-006 Gene

Genomic Locations for piR-46824-006 Gene
chr16:30,271,895-30,271,921
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand

Genomic View for piR-46824-006 Gene

Genes around piR-46824-006 on UCSC Golden Path with GeneCards custom track
piR-46824-006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-46824-006 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-46824-006 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-46824-006 Gene

Proteins for piR-46824-006 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-46824-006 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-46824-006 Gene

Domains & Families for piR-46824-006 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-46824-006 Gene

Function for piR-46824-006 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-46824-006 Gene

Localization for piR-46824-006 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-46824-006 Gene

Pathways & Interactions for piR-46824-006 Gene

PathCards logo

SuperPathways for piR-46824-006 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-46824-006 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-46824-006 Gene

Drugs & Compounds for piR-46824-006 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-46824-006 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-46824-006 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004C331D_9606 piRNA 27 1

ENA: DQ578712.1:1..27:ncRNA,

piR-46824-006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-46824-006 Gene

No ASD Table

Relevant External Links for piR-46824-006 Gene

GeneLoc Exon Structure for
piR-46824-006

No data available for mRNA/cDNA for piR-46824-006 Gene

Expression for piR-46824-006 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-46824-006 Gene

Orthologs for piR-46824-006 Gene

No data available for Orthologs and Evolution for piR-46824-006 Gene

Paralogs for piR-46824-006 Gene

No data available for Paralogs for piR-46824-006 Gene

Variants for piR-46824-006 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-46824-006 Gene

Disorders for piR-46824-006 Gene

No disorders were found for piR-46824-006 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-46824-006 Gene

Publications for piR-46824-006 Gene

No publications were found for piR-46824-006 Gene.

No data available for Mastermind for piR-46824-006 Gene

Products for piR-46824-006 Gene

Sources for piR-46824-006 Gene