Aliases for piR-46421 Gene

Data sources for piR-46421 Gene:

RNA type for piR-46421 Gene

piRNA

Aliases for piR-46421 Gene

  • PiR-46421 (ENA)

Previous GeneCards Identifiers for piR-46421 Gene

  • GC17M049296
  • GC17M049300
  • GC17M049303
  • GC17M049307

No data available for External Ids for piR-46421 Gene

Summaries for piR-46421 Gene

GeneCards Summary for piR-46421 Gene

piR-46421 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-46421 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-46421 Gene

Genomics for piR-46421 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-46421 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J049290 Enhancer 0.5 Ensembl 250.7 -0.1 -108 0.4 ZNF654 CTCF REST RAD21 SMC3 ARID3A ZNF24 TRIM22 lnc-ZNF652-1 piR-58710 piR-46421 piR-56567 PHOSPHO1 RPL21P124 ENSG00000250186 PHB ENSG00000238804 HSALNG0117174
GH17J049291 Enhancer 0.3 Ensembl 250.7 -0.7 -652 0.6 CTCF lnc-ZNF652-1 piR-58710 piR-46421 piR-56567 RPL21P124 ENSG00000250186 PHB PHOSPHO1 ZNF652 HSALNG0117174
GH17J049292 Enhancer 0.7 Ensembl 0.7 -3.3 -3251 1.8 NCOR1 CEBPB ARNT TAL1 NFE2 SMARCA4 MAFG TCF12 ZNF362 MTA2 HSALNG0117174 ENSG00000250186 RPL21P124 PHB RNU1-42P ENSG00000230532 SNF8 FLJ40194 piR-46421 PHOSPHO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-46421 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-46421 Gene

Latest Assembly
chr17:49,290,820-49,290,849
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-46421 Gene

Genes around piR-46421 on UCSC Golden Path with GeneCards custom track
piR-46421 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-46421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-46421 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-46421 Gene

Proteins for piR-46421 Gene

Post-translational modifications for piR-46421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-46421 Gene

Domains & Families for piR-46421 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-46421 Gene

Function for piR-46421 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-46421 Gene

Localization for piR-46421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-46421 Gene

Pathways & Interactions for piR-46421 Gene

PathCards logo

SuperPathways for piR-46421 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-46421 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-46421 Gene

Drugs & Compounds for piR-46421 Gene

No Compound Related Data Available

Transcripts for piR-46421 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-46421 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00002B8CCA_9606 piRNA 30 1

ENA: DQ578309.1:1..30:ncRNA,

piR-46421 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-46421 Gene

No ASD Table

Relevant External Links for piR-46421 Gene

GeneLoc Exon Structure for
piR-46421

No data available for mRNA/cDNA for piR-46421 Gene

Expression for piR-46421 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-46421 Gene

Orthologs for piR-46421 Gene

No data available for Orthologs and Evolution for piR-46421 Gene

Paralogs for piR-46421 Gene

No data available for Paralogs for piR-46421 Gene

Variants for piR-46421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-46421 Gene

Disorders for piR-46421 Gene

No disorders were found for piR-46421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-46421 Gene

Publications for piR-46421 Gene

No publications were found for piR-46421 Gene.

No data available for Mastermind for piR-46421 Gene

Products for piR-46421 Gene

Sources for piR-46421 Gene