Aliases for piR-44220 Gene

Data sources for piR-44220 Gene:

RNA type for piR-44220 Gene

piRNA

Aliases for piR-44220 Gene

  • PiR-44220 (ENA)

No data available for External Ids for piR-44220 Gene

Summaries for piR-44220 Gene

GeneCards Summary for piR-44220 Gene

piR-44220 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-44220 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-44220 Gene

Genomics for piR-44220 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-44220 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J063866 Enhancer 0.9 Ensembl ENCODE 0.7 +2.9 2860 1.6 ZNF654 CTCF HES1 ELF1 RAD21 NR2F1 DPF2 NR2F6 TOE1 L3MBTL2 FTSJ3 piR-44220 CSH2 lnc-GH2-1 SMARCD2
GH17J063869 Enhancer 0.6 Ensembl 0.4 +5.8 5756 1 MAFF ZNF316 MAFK ZBTB48 CTCF MAFG L3MBTL2 TRIM24 PRDM1 EMSY FTSJ3 CSH2 lnc-GH2-1 piR-44220 SMARCD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-44220 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-44220 Gene

Latest Assembly
chr17:63,863,939-63,863,968
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-44220 Gene

Genes around piR-44220 on UCSC Golden Path with GeneCards custom track
piR-44220 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-44220 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-44220 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-44220 Gene

Proteins for piR-44220 Gene

Post-translational modifications for piR-44220 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-44220 Gene

Domains & Families for piR-44220 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-44220 Gene

Function for piR-44220 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-44220 Gene

Localization for piR-44220 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-44220 Gene

Pathways & Interactions for piR-44220 Gene

PathCards logo

SuperPathways for piR-44220 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-44220 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-44220 Gene

Drugs & Compounds for piR-44220 Gene

No Compound Related Data Available

Transcripts for piR-44220 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-44220 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00003B0B4E_9606 piRNA 30 1

ENA: DQ576108.1:1..30:ncRNA,

piR-44220 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-44220 Gene

No ASD Table

Relevant External Links for piR-44220 Gene

GeneLoc Exon Structure for
piR-44220

No data available for mRNA/cDNA for piR-44220 Gene

Expression for piR-44220 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-44220 Gene

Orthologs for piR-44220 Gene

No data available for Orthologs and Evolution for piR-44220 Gene

Paralogs for piR-44220 Gene

No data available for Paralogs for piR-44220 Gene

Variants for piR-44220 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-44220 Gene

Disorders for piR-44220 Gene

No disorders were found for piR-44220 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-44220 Gene

Publications for piR-44220 Gene

No publications were found for piR-44220 Gene.

No data available for Mastermind for piR-44220 Gene

Products for piR-44220 Gene

Sources for piR-44220 Gene