piR-44085-017 Gene (RNA Gene)

 

GC20M047253
GIFtS:
3

Aliases for piR-44085-017 Gene

Subcategory (RNA class) for piR-44085-017 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-44085-017 Gene

  • PiR-44085 166

No data available for External Ids for piR-44085-017 Gene

Summaries for piR-44085-017 Gene

GeneCards Summary for piR-44085-017 Gene

piR-44085-017 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-44085-017 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-44085-017 Gene

Genomics for piR-44085-017 Gene

GeneHancer (GH) Regulatory Elements for piR-44085-017 Gene

Promoters and enhancers for piR-44085-017 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20J047251 Enhancer 1.1 Ensembl ENCODE dbSUPER 750.6 +0.0 46 2.9 FOXA1 SMARCE1 SP1 CBFA2T2 SMARCA4 DPF2 RXRA FOXA2 HDAC1 JUND piR-44085-017 piR-57133-370 ZMYND8
GH20J047256 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -5.0 -5043 4.5 SP1 ETV6 HLF IKZF1 CEBPG MLLT1 ZNF687 CREM CDC5L EGR1 SLC35C2 piR-44085-017 NONHSAG031911.2 ZMYND8
GH20J047261 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -9.5 -9498 2.8 RELA MLLT1 ZNF687 POLR2A IKZF1 TRIM22 IKZF2 LARP7 PKNOX1 CBFB piR-44085-017 NONHSAG031911.2 ZMYND8
GH20J047240 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 +11.5 11541 2 LCORL POLR2A ZNF561 ZNF37A FOS YY1 NFIC JUND NFIA ZNF334 RPL35AP RNU6-497P ZMYND8 NCOA3 piR-44085-017 piR-57133-370
GH20J047272 Enhancer 1.1 ENCODE dbSUPER 0.3 -22.8 -22759 7.4 SP1 CTCF ZBTB6 RBPJ SMARCE1 POLR2A USF2 JUND RELA HLF SLC35C2 TP53RK ZMYND8 RNU6-497P RPL35AP NONHSAG031911.2 piR-44085-017
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-44085-017 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-44085-017 Gene

Genomic Locations for piR-44085-017 Gene
chr20:47,253,269-47,253,298
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-44085-017 Gene

Genes around piR-44085-017 on UCSC Golden Path with GeneCards custom track

piR-44085-017 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-44085-017 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-44085-017 Gene

Proteins for piR-44085-017 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-44085-017 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-44085-017 Gene

Domains & Families for piR-44085-017 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-44085-017 Gene

Function for piR-44085-017 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for piR-44085-017 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-44085-017 Gene

Localization for piR-44085-017 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-44085-017 Gene

Pathways & Interactions for piR-44085-017 Gene

PathCards logo

SuperPathways for piR-44085-017 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-44085-017 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-44085-017 Gene

Drugs & Compounds for piR-44085-017 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-44085-017 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for piR-44085-017 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-44085-017 Gene

No ASD Table

Relevant External Links for piR-44085-017 Gene

GeneLoc Exon Structure for
piR-44085-017

Expression for piR-44085-017 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-44085-017 Gene

Orthologs for piR-44085-017 Gene

No data available for Orthologs and Evolution for piR-44085-017 Gene

Paralogs for piR-44085-017 Gene

No data available for Paralogs for piR-44085-017 Gene

Variants for piR-44085-017 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-44085-017 Gene

Disorders for piR-44085-017 Gene

No disorders were found for piR-44085-017 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-44085-017 Gene

Publications for piR-44085-017 Gene

No publications were found for piR-44085-017 Gene.

No data available for External Links for piR-44085-017 Gene

Products for piR-44085-017 Gene

Sources for piR-44085-017 Gene