piR-43709 Gene (RNA Gene)

 

GC11P133068
GIFtS:
2
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Aliases for piR-43709 Gene

Data sources for piR-43709 Gene:

Subcategory (RNA class) for piR-43709 Gene

piRNA

Aliases for piR-43709 Gene

  • PiR-43709 (ENA)

No data available for External Ids for piR-43709 Gene

Summaries for piR-43709 Gene

GeneCards Summary for piR-43709 Gene

piR-43709 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-43709 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-43709 Gene

Genomics for piR-43709 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-43709 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J133063 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 250.7 -0.4 -390 1.5 CTCF SIN3A GABPA RXRA GABPB1 RAD21 TAF1 ZBTB40 REST MAX ENSG00000279711 piR-43709 lnc-NTM-7 HSALNG0088317 OPCML
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-43709 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-43709 Gene

Latest Assembly
chr11:133,064,864-133,064,893
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-43709 Gene

Genes around piR-43709 on UCSC Golden Path with GeneCards custom track
piR-43709 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-43709 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-43709 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-43709 Gene

Proteins for piR-43709 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for piR-43709 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-43709 Gene

Domains & Families for piR-43709 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-43709 Gene

Function for piR-43709 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-43709 Gene

Localization for piR-43709 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-43709 Gene

Pathways & Interactions for piR-43709 Gene

PathCards logo

SuperPathways for piR-43709 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-43709 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-43709 Gene

Drugs & Compounds for piR-43709 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for piR-43709 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-43709 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000004C9D6_9606 piRNA 30 1

ENA: DQ575597.1:1..30:ncRNA,

piR-43709 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-43709 Gene

No ASD Table

Relevant External Links for piR-43709 Gene

GeneLoc Exon Structure for
piR-43709

No data available for mRNA/cDNA for piR-43709 Gene

Expression for piR-43709 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-43709 Gene

Orthologs for piR-43709 Gene

No data available for Orthologs and Evolution for piR-43709 Gene

Paralogs for piR-43709 Gene

No data available for Paralogs for piR-43709 Gene

Variants for piR-43709 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-43709 Gene

Disorders for piR-43709 Gene

No disorders were found for piR-43709 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-43709 Gene

Publications for piR-43709 Gene

No publications were found for piR-43709 Gene.

No data available for Mastermind for piR-43709 Gene

Products for piR-43709 Gene

Sources for piR-43709 Gene