piR-43676-004 Gene (RNA Gene)

 

GC10M027690
GIFtS:
2

Aliases for piR-43676-004 Gene

Subcategory (RNA class) for piR-43676-004 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-43676-004 Gene

No data available for External Ids for piR-43676-004 Gene

Summaries for piR-43676-004 Gene

GeneCards Summary for piR-43676-004 Gene

piR-43676-004 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-43676-004 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-43676-004 Gene

Genomics for piR-43676-004 Gene

GeneHancer (GH) Regulatory Elements for piR-43676-004 Gene

Promoters and enhancers for piR-43676-004 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J027656 Enhancer 1 Ensembl ENCODE 0.3 +34.1 34136 0.8 CTCF ZNF133 CC2D1A RAD21 GTF2F1 SP7 ZSCAN21 ZNF24 ARID2 REST MASTL YME1L1 ARMC4 WAC-AS1 PTCHD3 piR-43676-004 piR-40110-060
GH10J027699 Enhancer 0.5 Ensembl 0.4 -9.1 -9064 0.4 SP1 FOXA2 TFAP4 FOXA1 HNF4A BCL6 piR-42491-022 piR-43676-004 MKX
GH10J027701 Enhancer 0.5 Ensembl ENCODE 0.4 -10.8 -10764 2.6 EZH2 CUX1 MKX MKX-AS1 piR-42491-022 piR-43676-004
GH10J027679 Enhancer 0.4 Ensembl ENCODE 0.4 +11.7 11736 4.4 ZNF513 MKX MKX-AS1 ARMC4 PTCHD3 piR-43676-004 piR-40110-060
GH10J027624 Enhancer 0.7 Ensembl ENCODE CraniofacialAtlas 0.2 +65.5 65460 2.4 POLR2A ZC3H11A MASTL YME1L1 PTCHD3 ABI1 piR-40110-060 piR-43676-004
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-43676-004 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-43676-004 Gene

Genomic Locations for piR-43676-004 Gene
chr10:27,690,907-27,690,937
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-43676-004 Gene

Genes around piR-43676-004 on UCSC Golden Path with GeneCards custom track

piR-43676-004 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-43676-004 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-43676-004 Gene

Proteins for piR-43676-004 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-43676-004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-43676-004 Gene

Domains & Families for piR-43676-004 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-43676-004 Gene

Function for piR-43676-004 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for piR-43676-004 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-43676-004 Gene

Localization for piR-43676-004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-43676-004 Gene

Pathways & Interactions for piR-43676-004 Gene

PathCards logo

SuperPathways for piR-43676-004 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-43676-004 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-43676-004 Gene

Drugs & Compounds for piR-43676-004 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-43676-004 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for piR-43676-004 Gene

(2) RNACentral transcripts :
(2) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-43676-004 Gene

No ASD Table

Relevant External Links for piR-43676-004 Gene

GeneLoc Exon Structure for
piR-43676-004

Expression for piR-43676-004 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-43676-004 Gene

Orthologs for piR-43676-004 Gene

No data available for Orthologs and Evolution for piR-43676-004 Gene

Paralogs for piR-43676-004 Gene

No data available for Paralogs for piR-43676-004 Gene

Variants for piR-43676-004 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-43676-004 Gene

Disorders for piR-43676-004 Gene

No disorders were found for piR-43676-004 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-43676-004 Gene

Publications for piR-43676-004 Gene

No publications were found for piR-43676-004 Gene.

No data available for External Links for piR-43676-004 Gene

Products for piR-43676-004 Gene

Sources for piR-43676-004 Gene