Aliases for piR-43328 Gene

Data sources for piR-43328 Gene:

RNA type for piR-43328 Gene

piRNA

Aliases for piR-43328 Gene

  • PiR-43328 (ENA)

Previous GeneCards Identifiers for piR-43328 Gene

  • GC11M130881
  • GC11M130895
  • GC11M130898
  • GC11M130901

No data available for External Ids for piR-43328 Gene

Summaries for piR-43328 Gene

GeneCards Summary for piR-43328 Gene

piR-43328 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-43328 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-43328 Gene

Genomics for piR-43328 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-43328 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J130877 Enhancer 0.3 Ensembl dbSUPER 250.7 -1.9 -1885 1 piR-43328 SNX19 ADAMTS8 ADAMTS15 lnc-ADAMTS8-5
GH11J130878 Enhancer 0.3 ENCODE dbSUPER 250.7 -1.1 -1075 0.2 piR-43328 SNX19 ADAMTS8 lnc-ADAMTS8-5 ADAMTS15
GH11J130876 Enhancer 0.2 dbSUPER 250.7 -0.5 -484 0.5 piR-43328 piR-46894 SNX19 ADAMTS8 lnc-ADAMTS8-5 ADAMTS15
GH11J130896 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -21.6 -21565 3.2 ATF3 YY1 FOXA2 RXRA ZBTB33 JUND HNF4A FOXA1 BHLHE40 REST SNX19 ADAMTS8 ENSG00000255455 LINC02551 ADAMTS15 lnc-ADAMTS8-5 piR-43328
GH11J130894 Enhancer 0.9 ENCODE dbSUPER 0.4 -18.5 -18463 0.8 ZNF654 NCOR1 ZIC2 CTCF REST TRIM22 FEZF1 ZNF513 FOXA2 RAD21 SNX19 ENSG00000255455 ADAMTS8 LINC02551 ADAMTS15 lnc-ADAMTS8-5 piR-43328
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-43328 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-43328 Gene

Latest Assembly
chr11:130,876,196-130,876,226
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-43328 Gene

Genes around piR-43328 on UCSC Golden Path with GeneCards custom track
piR-43328 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-43328 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-43328 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-43328 Gene

Proteins for piR-43328 Gene

Post-translational modifications for piR-43328 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-43328 Gene

Domains & Families for piR-43328 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-43328 Gene

Function for piR-43328 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-43328 Gene

Localization for piR-43328 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-43328 Gene

Pathways & Interactions for piR-43328 Gene

PathCards logo

SuperPathways for piR-43328 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-43328 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-43328 Gene

Drugs & Compounds for piR-43328 Gene

No Compound Related Data Available

Transcripts for piR-43328 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-43328 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000343285_9606 piRNA 31 1

ENA: DQ575216.1:1..31:ncRNA,

piR-43328 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-43328 Gene

No ASD Table

Relevant External Links for piR-43328 Gene

GeneLoc Exon Structure for
piR-43328

No data available for mRNA/cDNA for piR-43328 Gene

Expression for piR-43328 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-43328 Gene

Orthologs for piR-43328 Gene

No data available for Orthologs and Evolution for piR-43328 Gene

Paralogs for piR-43328 Gene

No data available for Paralogs for piR-43328 Gene

Variants for piR-43328 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-43328 Gene

Disorders for piR-43328 Gene

No disorders were found for piR-43328 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-43328 Gene

Publications for piR-43328 Gene

No publications were found for piR-43328 Gene.

No data available for Mastermind for piR-43328 Gene

Products for piR-43328 Gene

Sources for piR-43328 Gene