Aliases for piR-42952 Gene

Subcategory (RNA class) for piR-42952 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-42952 Gene

  • PiR-42952 164

No data available for External Ids for piR-42952 Gene

Summaries for piR-42952 Gene

GeneCards Summary for piR-42952 Gene

piR-42952 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-42952 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-42952 Gene

Genomics for piR-42952 Gene

GeneHancer (GH) Regulatory Elements for piR-42952 Gene

Promoters and enhancers for piR-42952 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205144 Enhancer 0.8 Ensembl ENCODE 500.7 +0.9 934 2.5 TEAD1 ZNF316 MAFF MLLT1 MAFK CEBPB JUND MAFG JUN NFIL3 piR-42952 DSTYK TMCC2 RBBP5 ENSG00000225063 NUAK2 ENSG00000236108 lnc-CNTN2-3
GH01J205146 Enhancer 0.7 Ensembl ENCODE 500.7 -1.4 -1360 1.5 ZNF316 NFIC ZNF592 NFE2 MAFK MAFG NFE2L2 IKZF1 EMSY piR-42952 TMCC2 RBBP5 ENSG00000225063 DSTYK NUAK2 lnc-RBBP5-1
GH01J205141 Enhancer 1 Ensembl ENCODE 0.7 +4.0 3994 1.2 CTCF ZBTB11 REST MYC CTBP1 RAD21 TRIM22 GATAD2B SMC3 SIN3A DSTYK CNTN2 TMCC2 piR-42952 ENSG00000236108 lnc-CNTN2-3
GH01J205156 Enhancer 1 ENCODE 0.4 -11.8 -11835 1.6 PHB2 ZBTB11 AFF1 TARDBP HES1 MYC TOE1 CTBP1 JUN HINFP TMCC2 DSTYK RBBP5 ENSG00000225063 CNTN2 NFASC lnc-RBBP5-1 piR-42952
GH01J205137 Enhancer 0.6 Ensembl ENCODE 0.4 +7.2 7180 1.6 TRIM28 NR2F1 EGR1 NR2C1 PKNOX1 DSTYK TMCC2 CNTN2 ENSG00000225063 TMEM81 ENSG00000236108 lnc-CNTN2-3 piR-42952
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-42952 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-42952 Gene

Genomic Locations for piR-42952 Gene
chr1:205,145,765-205,145,795
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-42952 Gene

Genes around piR-42952 on UCSC Golden Path with GeneCards custom track

piR-42952 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-42952 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-42952 Gene

Proteins for piR-42952 Gene

Post-translational modifications for piR-42952 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-42952 Gene

Domains & Families for piR-42952 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-42952 Gene

Function for piR-42952 Gene

Phenotypes From GWAS Catalog for piR-42952 Gene

miRNA for piR-42952 Gene

miRTarBase miRNAs that target piR-42952

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-42952 Gene

Localization for piR-42952 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-42952 Gene

Pathways & Interactions for piR-42952 Gene

PathCards logo

SuperPathways for piR-42952 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-42952 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-42952 Gene

Drugs & Compounds for piR-42952 Gene

No Compound Related Data Available

Transcripts for piR-42952 Gene

mRNA/cDNA for piR-42952 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-42952 Gene

No ASD Table

Relevant External Links for piR-42952 Gene

GeneLoc Exon Structure for
piR-42952

Expression for piR-42952 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-42952 Gene

Orthologs for piR-42952 Gene

No data available for Orthologs and Evolution for piR-42952 Gene

Paralogs for piR-42952 Gene

No data available for Paralogs for piR-42952 Gene

Variants for piR-42952 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-42952 Gene

Disorders for piR-42952 Gene

No disorders were found for piR-42952 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-42952 Gene

Publications for piR-42952 Gene

No publications were found for piR-42952 Gene.

No data available for Mastermind for piR-42952 Gene

Products for piR-42952 Gene

Sources for piR-42952 Gene