Aliases for piR-42952 Gene

Subcategory (RNA class) for piR-42952 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-42952 Gene

  • PiR-42952 166

No data available for External Ids for piR-42952 Gene

Summaries for piR-42952 Gene

GeneCards Summary for piR-42952 Gene

piR-42952 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-42952 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-42952 Gene

Genomics for piR-42952 Gene

GeneHancer (GH) Regulatory Elements for piR-42952 Gene

Promoters and enhancers for piR-42952 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205144 Enhancer 0.8 Ensembl ENCODE 750.6 +0.9 934 2.5 MAFK PRDM1 ZNF384 CEBPB ZNF316 MAFG MLLT1 TEAD1 NFIL3 JUN piR-42952 DSTYK TMCC2 RBBP5 ENSG00000225063 NUAK2 ENSG00000236108 lnc-CNTN2-3
GH01J205146 Enhancer 0.7 Ensembl ENCODE 750.6 -1.4 -1360 1.5 MAFK IKZF1 ZNF316 NFE2 MAFG NFIC ZNF592 EMSY piR-42952 TMCC2 RBBP5 ENSG00000225063 DSTYK NUAK2 lnc-RBBP5-1
GH01J205141 Enhancer 1 Ensembl ENCODE 0.6 +4.0 3994 1.2 CTCF ZNF362 L3MBTL2 MAX RAD21 MNT ZNF148 MAFK SMARCA4 MTA1 DSTYK CNTN2 TMCC2 piR-42952 ENSG00000236108 lnc-CNTN2-3
GH01J205156 Enhancer 0.9 ENCODE 0.4 -11.8 -11835 1.6 ZBTB40 SMARCE1 CC2D1A ELF1 L3MBTL2 TEAD4 ZKSCAN8 BACH1 CBFA2T2 SMARCA4 TMCC2 RBBP5 DSTYK ENSG00000225063 ELK4 CNTN2 lnc-RBBP5-1 piR-42952
GH01J205137 Enhancer 0.5 Ensembl ENCODE 0.4 +7.2 7180 1.6 PKNOX1 TRIM28 DSTYK TMCC2 CNTN2 ENSG00000225063 TMEM81 ENSG00000236108 lnc-CNTN2-3 piR-42952
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-42952 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-42952 Gene

Genomic Locations for piR-42952 Gene
chr1:205,145,765-205,145,795
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-42952 Gene

Genes around piR-42952 on UCSC Golden Path with GeneCards custom track

piR-42952 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-42952 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-42952 Gene

Proteins for piR-42952 Gene

Post-translational modifications for piR-42952 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-42952 Gene

Domains & Families for piR-42952 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-42952 Gene

Function for piR-42952 Gene

Phenotypes From GWAS Catalog for piR-42952 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-42952 Gene

Localization for piR-42952 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-42952 Gene

Pathways & Interactions for piR-42952 Gene

PathCards logo

SuperPathways for piR-42952 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-42952 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-42952 Gene

Drugs & Compounds for piR-42952 Gene

No Compound Related Data Available

Transcripts for piR-42952 Gene

mRNA/cDNA for piR-42952 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-42952 Gene

No ASD Table

Relevant External Links for piR-42952 Gene

GeneLoc Exon Structure for
piR-42952

Expression for piR-42952 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-42952 Gene

Orthologs for piR-42952 Gene

No data available for Orthologs and Evolution for piR-42952 Gene

Paralogs for piR-42952 Gene

No data available for Paralogs for piR-42952 Gene

Variants for piR-42952 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-42952 Gene

Disorders for piR-42952 Gene

No disorders were found for piR-42952 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-42952 Gene

Publications for piR-42952 Gene

No publications were found for piR-42952 Gene.

No data available for External Links for piR-42952 Gene

Products for piR-42952 Gene

Sources for piR-42952 Gene