Aliases for piR-42793 Gene

Data sources for piR-42793 Gene:

RNA type for piR-42793 Gene

piRNA

Aliases for piR-42793 Gene

  • PiR-42793 (ENA)

Previous GeneCards Identifiers for piR-42793 Gene

  • GC11P069148
  • GC11P069153
  • GC11P069164
  • GC11P069176

No data available for External Ids for piR-42793 Gene

Summaries for piR-42793 Gene

GeneCards Summary for piR-42793 Gene

piR-42793 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-42793 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-42793 Gene

Genomics for piR-42793 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-42793 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J069140 Enhancer 0.8 FANTOM5 Ensembl 250.7 +0.8 790 2.8 MNT RAD51 SPI1 L3MBTL2 CBFA2T2 USF2 CBX3 USF1 CEBPB piR-42793 piR-31023 MRGPRF MRGPRF-AS1 LTO1 FGF4 TPCN2 piR-40633 lnc-TPCN2-5 SMIM38
GH11J069137 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -3.1 -3090 2.2 CEBPB MAX EP300 RFX5 SMC3 TBP TCF7L2 ZKSCAN1 ZNF143 ZNF652 HSALNG0085315 MRGPRF-AS1 MRGPRF LTO1 FGF4 piR-42793 lnc-TPCN2-5 SMIM38 LOC338694 ENSG00000287725
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-42793 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-42793 Gene

Latest Assembly
chr11:69,141,211-69,141,236
(GRCh38/hg38)
Size:
26 bases
Orientation:
Plus strand

Genomic View for piR-42793 Gene

Genes around piR-42793 on UCSC Golden Path with GeneCards custom track
piR-42793 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-42793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-42793 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-42793 Gene

Proteins for piR-42793 Gene

Post-translational modifications for piR-42793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-42793 Gene

Domains & Families for piR-42793 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-42793 Gene

Function for piR-42793 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-42793 Gene

Localization for piR-42793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-42793 Gene

Pathways & Interactions for piR-42793 Gene

PathCards logo

SuperPathways for piR-42793 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-42793 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-42793 Gene

Drugs & Compounds for piR-42793 Gene

No Compound Related Data Available

Transcripts for piR-42793 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-42793 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000010508C_9606 piRNA 26 1

ENA: DQ574681.1:1..26:ncRNA,

piR-42793 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-42793 Gene

No ASD Table

Relevant External Links for piR-42793 Gene

GeneLoc Exon Structure for
piR-42793

No data available for mRNA/cDNA for piR-42793 Gene

Expression for piR-42793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-42793 Gene

Orthologs for piR-42793 Gene

No data available for Orthologs and Evolution for piR-42793 Gene

Paralogs for piR-42793 Gene

No data available for Paralogs for piR-42793 Gene

Variants for piR-42793 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-42793 Gene

Disorders for piR-42793 Gene

No disorders were found for piR-42793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-42793 Gene

Publications for piR-42793 Gene

No publications were found for piR-42793 Gene.

No data available for Mastermind for piR-42793 Gene

Products for piR-42793 Gene

Sources for piR-42793 Gene