Aliases for piR-42692 Gene

Data sources for piR-42692 Gene:

Subcategory (RNA class) for piR-42692 Gene

piRNA

Aliases for piR-42692 Gene

  • PiR-42692 (ENA)

Previous GeneCards Identifiers for piR-42692 Gene

  • GC17M017867

No data available for External Ids for piR-42692 Gene

Summaries for piR-42692 Gene

GeneCards Summary for piR-42692 Gene

piR-42692 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-42692 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-42692 Gene

Genomics for piR-42692 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-42692 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J017866 Enhancer 0.4 Ensembl dbSUPER 250.7 -0.6 -632 0.4 BACH1 piR-42692 TOM1L2 SREBF1 MIR33B RAI1 piR-35674-210
GH17J017868 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.8 -2832 3.2 CTCF JUND ZNF652 SP1 SIN3A REST RAD21 POLR2A MNT USF1 TOM1L2 SREBF1 MIR33B RAI1 DRC3 piR-42692 piR-35674-210
GH17J017874 Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -10.3 -10289 5.1 ZIC2 MAFF ZNF341 RXRA ZNF316 JUND ZNF2 MAFK ZNF24 HNF4A TOM1L2 SREBF1 MIR33B RAI1 DRC3 GID4 piR-42692 piR-35674-210
GH17J017863 Enhancer 0.6 FANTOM5 Ensembl dbSUPER 0.7 +3.5 3468 2.2 GATA2 HSALNG0114993 TOM1L2 SREBF1 MIR33B RAI1 LLGL1 piR-42692
GH17J017891 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -24.9 -24944 0.8 DEK CTCF THAP11 REST MAX TRIM22 SMC3 RAD21 SMARCA5 TBX3 ENSG00000197815 piR-35674-210 piR-42692 SREBF1 TOM1L2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-42692 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-42692 Gene

Latest Assembly
chr17:17,866,339-17,866,369
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for piR-42692 Gene

Genes around piR-42692 on UCSC Golden Path with GeneCards custom track
piR-42692 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-42692 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-42692 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-42692 Gene

Proteins for piR-42692 Gene

Post-translational modifications for piR-42692 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-42692 Gene

Domains & Families for piR-42692 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-42692 Gene

Function for piR-42692 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-42692 Gene

Localization for piR-42692 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-42692 Gene

Pathways & Interactions for piR-42692 Gene

PathCards logo

SuperPathways for piR-42692 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-42692 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-42692 Gene

Drugs & Compounds for piR-42692 Gene

No Compound Related Data Available

Transcripts for piR-42692 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-42692 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000049A05_9606 piRNA 31 1

ENA: DQ574580.1:1..31:ncRNA,

piR-42692 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-42692 Gene

No ASD Table

Relevant External Links for piR-42692 Gene

GeneLoc Exon Structure for
piR-42692

No data available for mRNA/cDNA for piR-42692 Gene

Expression for piR-42692 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-42692 Gene

Orthologs for piR-42692 Gene

No data available for Orthologs and Evolution for piR-42692 Gene

Paralogs for piR-42692 Gene

No data available for Paralogs for piR-42692 Gene

Variants for piR-42692 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-42692 Gene

Disorders for piR-42692 Gene

No disorders were found for piR-42692 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-42692 Gene

Publications for piR-42692 Gene

No publications were found for piR-42692 Gene.

No data available for Mastermind for piR-42692 Gene

Products for piR-42692 Gene

Sources for piR-42692 Gene