Aliases for piR-41828 Gene

Subcategory (RNA class) for piR-41828 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-41828 Gene

  • PiR-41828 161

Previous GeneCards Identifiers for piR-41828 Gene

  • GC16P031086
  • GC16P031410

No data available for External Ids for piR-41828 Gene

Summaries for piR-41828 Gene

GeneCards Summary for piR-41828 Gene

piR-41828 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-41828 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-41828 Gene

Genomics for piR-41828 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-41828 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J031079 Enhancer 0.6 Ensembl 600.7 -0.3 -263 4.2 PRDM10 ZIC2 RBFOX2 KLF9 TAF1 PCBP1 ZNF707 TBX3 SPI1 GABPA piR-41828 piR-46049 piR-54898 HSD3B7 ENSG00000260911 RNF40 ZNF646 FBRS PHKG2 ZNF688
GH16J031082 Enhancer 0.3 Ensembl 0.7 +2.1 2137 0.2 POLR2A piR-37106 piR-41828 PRSS53 ZNF646 ZNF668
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-41828 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-41828 Gene

Genomic Locations for piR-41828 Gene
chr16:31,080,764-31,080,791
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand

Genomic View for piR-41828 Gene

Genes around piR-41828 on UCSC Golden Path with GeneCards custom track
piR-41828 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-41828 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-41828 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-41828 Gene

Proteins for piR-41828 Gene

Post-translational modifications for piR-41828 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-41828 Gene

Domains & Families for piR-41828 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-41828 Gene

Function for piR-41828 Gene

Phenotypes From GWAS Catalog for piR-41828 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-41828 Gene

Localization for piR-41828 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-41828 Gene

Pathways & Interactions for piR-41828 Gene

PathCards logo

SuperPathways for piR-41828 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-41828 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-41828 Gene

Drugs & Compounds for piR-41828 Gene

No Compound Related Data Available

Transcripts for piR-41828 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-41828 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001FF474_9606 piRNA 28 1

ENA: DQ573716.1:1..28:ncRNA,

piR-41828 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-41828 Gene

No ASD Table

Relevant External Links for piR-41828 Gene

GeneLoc Exon Structure for
piR-41828

No data available for mRNA/cDNA for piR-41828 Gene

Expression for piR-41828 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-41828 Gene

Orthologs for piR-41828 Gene

No data available for Orthologs and Evolution for piR-41828 Gene

Paralogs for piR-41828 Gene

No data available for Paralogs for piR-41828 Gene

Variants for piR-41828 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-41828 Gene

Disorders for piR-41828 Gene

No disorders were found for piR-41828 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-41828 Gene

Publications for piR-41828 Gene

No publications were found for piR-41828 Gene.

No data available for Mastermind for piR-41828 Gene

Products for piR-41828 Gene

Sources for piR-41828 Gene