Aliases for piR-41406-018 Gene

Subcategory (RNA class) for piR-41406-018 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for piR-41406-018 Gene

  • PiR-41406 166

No data available for External Ids for piR-41406-018 Gene

Summaries for piR-41406-018 Gene

GeneCards Summary for piR-41406-018 Gene

piR-41406-018 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-41406-018 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-41406-018 Gene

Genomics for piR-41406-018 Gene

GeneHancer (GH) Regulatory Elements for piR-41406-018 Gene

Promoters and enhancers for piR-41406-018 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J112433 Enhancer 0.3 Ensembl 750.6 -1.0 -1020 0.6 ZNF121 piR-41406-018 ALDH2 RPL6 PTPN11
GH12J112417 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -15.4 -15420 3 ZNF785 ZBTB40 CTCF SREBF1 SIX5 SMARCE1 POLR2A ATF1 CREB1 HCFC1 RPL6 ATXN2 PTPN11 lnc-PTPN11-1 ADAM1A PCNPP1 MAPKAPK5 TRAFD1 SLC8B1 NAA25
GH12J112422 Enhancer 0.5 ENCODE 0.4 -11.8 -11799 0.3 SP1 RXRA ATF3 YY1 NR2F2 RAD21 MAX HNF4A PTPN11 RPL6 piR-41406-018
GH12J112430 Enhancer 0.2 Ensembl 0.6 -4.3 -4320 0.4 piR-41406-018 RPL6 PTPN11
GH12J112431 Enhancer 0.2 Ensembl 0.6 -3.0 -3020 1.8 ADAM1A TMEM116 piR-41406-018 RPL6 PTPN11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-41406-018 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-41406-018 Gene

Genomic Locations for piR-41406-018 Gene
chr12:112,434,521-112,434,549
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand

Genomic View for piR-41406-018 Gene

Genes around piR-41406-018 on UCSC Golden Path with GeneCards custom track

piR-41406-018 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-41406-018 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-41406-018 Gene

Proteins for piR-41406-018 Gene

Post-translational modifications for piR-41406-018 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-41406-018 Gene

Domains & Families for piR-41406-018 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-41406-018 Gene

Function for piR-41406-018 Gene

Phenotypes From GWAS Catalog for piR-41406-018 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-41406-018 Gene

Localization for piR-41406-018 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-41406-018 Gene

Pathways & Interactions for piR-41406-018 Gene

PathCards logo

SuperPathways for piR-41406-018 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-41406-018 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for piR-41406-018 Gene

Drugs & Compounds for piR-41406-018 Gene

No Compound Related Data Available

Transcripts for piR-41406-018 Gene

mRNA/cDNA for piR-41406-018 Gene

(1) RNACentral transcripts :
(1) ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-41406-018 Gene

No ASD Table

Relevant External Links for piR-41406-018 Gene

GeneLoc Exon Structure for
piR-41406-018

Expression for piR-41406-018 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-41406-018 Gene

Orthologs for piR-41406-018 Gene

No data available for Orthologs and Evolution for piR-41406-018 Gene

Paralogs for piR-41406-018 Gene

No data available for Paralogs for piR-41406-018 Gene

Variants for piR-41406-018 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-41406-018 Gene

Disorders for piR-41406-018 Gene

No disorders were found for piR-41406-018 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-41406-018 Gene

Publications for piR-41406-018 Gene

No publications were found for piR-41406-018 Gene.

No data available for External Links for piR-41406-018 Gene

Products for piR-41406-018 Gene

Sources for piR-41406-018 Gene