Aliases for piR-41406-013 Gene

Data sources for piR-41406-013 Gene:

Subcategory (RNA class) for piR-41406-013 Gene

piRNA

Aliases for piR-41406-013 Gene

  • PiR-41406 (ENA)

No data available for External Ids for piR-41406-013 Gene

Summaries for piR-41406-013 Gene

GeneCards Summary for piR-41406-013 Gene

piR-41406-013 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-41406-013 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-41406-013 Gene

Genomics for piR-41406-013 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-41406-013 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J114262 Enhancer 0.8 Ensembl ENCODE 0.7 -4.2 -4152 1.6 IKZF1 CTCF REST RAD21 ZNF316 JUND SPI1 MAX HNF4A ZNF143 HTR3A RNU6-1107P NNMT HSALNG0087294 piR-41406-013 lnc-NNMT-1 ENSG00000256947 RBM7
GH11J114264 Enhancer 0.6 Ensembl 0.7 -2.1 -2077 1 RXRA JUND HNF4A RAD21 REST CEBPB TAF1 HNF4G SP1 YY1 HTR3A RNU6-1107P piR-41406-013 NNMT HSALNG0087294 lnc-NNMT-1 ENSG00000256947 RBM7
GH11J114261 Enhancer 0.8 ENCODE dbSUPER 0.4 -6.0 -5954 0.2 CTCF REST TRIM22 SMC3 RAD21 ZNF143 ARID2 YY1 ZBTB6 CBX3 HSALNG0087294 NNMT lnc-NNMT-1 piR-41406-013 ENSG00000256947 RBM7
GH11J114260 Enhancer 0.5 ENCODE dbSUPER 0.4 -6.3 -6304 0 CTCF RAD21 HSALNG0087294 NNMT lnc-NNMT-1 piR-41406-013 ENSG00000256947 RBM7
GH11J114275 Enhancer 0.3 FANTOM5 0.4 +8.2 8233 0.4 RXRA HSALNG0087295 ZBTB16 piR-41406-013 NNMT ENSG00000256947 RBM7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-41406-013 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-41406-013 Gene

Latest Assembly
chr11:114,267,178-114,267,206
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand

Genomic View for piR-41406-013 Gene

Genes around piR-41406-013 on UCSC Golden Path with GeneCards custom track
piR-41406-013 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-41406-013 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-41406-013 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-41406-013 Gene

Proteins for piR-41406-013 Gene

Post-translational modifications for piR-41406-013 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-41406-013 Gene

Domains & Families for piR-41406-013 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-41406-013 Gene

Function for piR-41406-013 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-41406-013 Gene

Localization for piR-41406-013 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-41406-013 Gene

Pathways & Interactions for piR-41406-013 Gene

PathCards logo

SuperPathways for piR-41406-013 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-41406-013 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-41406-013 Gene

Drugs & Compounds for piR-41406-013 Gene

No Compound Related Data Available

Transcripts for piR-41406-013 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-41406-013 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001034C4_9606 piRNA 29 1

ENA: DQ573294.1:1..29:ncRNA,

piR-41406-013 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-41406-013 Gene

No ASD Table

Relevant External Links for piR-41406-013 Gene

GeneLoc Exon Structure for
piR-41406-013

No data available for mRNA/cDNA for piR-41406-013 Gene

Expression for piR-41406-013 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-41406-013 Gene

Orthologs for piR-41406-013 Gene

No data available for Orthologs and Evolution for piR-41406-013 Gene

Paralogs for piR-41406-013 Gene

No data available for Paralogs for piR-41406-013 Gene

Variants for piR-41406-013 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-41406-013 Gene

Disorders for piR-41406-013 Gene

No disorders were found for piR-41406-013 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-41406-013 Gene

Publications for piR-41406-013 Gene

No publications were found for piR-41406-013 Gene.

No data available for Mastermind for piR-41406-013 Gene

Products for piR-41406-013 Gene

Sources for piR-41406-013 Gene