piR-41229 Gene (RNA Gene)

 

GC18M079820
GIFtS:
2
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Aliases for piR-41229 Gene

Subcategory (RNA class) for piR-41229 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-41229 Gene

  • PiR-41229 161

No data available for External Ids for piR-41229 Gene

Summaries for piR-41229 Gene

GeneCards Summary for piR-41229 Gene

piR-41229 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-41229 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-41229 Gene

Genomics for piR-41229 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-41229 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J079819 Enhancer 0.6 ENCODE 600.7 -0.5 -467 0.9 RELA EED RUNX3 BCL11A IKZF1 SPI1 MAX POLR2A BHLHE40 MYC piR-41229 SLC66A2 HSBP1L1 KCNG2 lnc-KCNG2-1
GH18J079822 Enhancer 0.5 Ensembl 0.7 -3.7 -3663 1.6 CEBPA GABPB1 RARA ETV4 POLR2A MAX CEBPG HSBP1L1 RBFADN lnc-KCNG2-1 piR-41229 KCNG2 SLC66A2
GH18J079811 Enhancer 0.3 Ensembl 0.4 +7.9 7937 0.4 ZNF558 HSBP1L1 piR-41229 KCNG2 ENSG00000267780 SLC66A2
GH18J079805 Enhancer 0.3 ENCODE 0.4 +14.3 14262 0.2 MNT TXNL4A KCNG2 ENSG00000267780 piR-41229 SLC66A2
GH18J079812 Enhancer 0.2 Ensembl 0.4 +7.3 7337 0.4 HSBP1L1 piR-41229 KCNG2 ENSG00000267780 SLC66A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-41229 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-41229 Gene

Genomic Locations for piR-41229 Gene
chr18:79,819,907-79,819,938
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for piR-41229 Gene

Genes around piR-41229 on UCSC Golden Path with GeneCards custom track
piR-41229 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-41229 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-41229 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-41229 Gene

Proteins for piR-41229 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-41229 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-41229 Gene

Domains & Families for piR-41229 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-41229 Gene

Function for piR-41229 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for piR-41229 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-41229 Gene

Localization for piR-41229 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-41229 Gene

Pathways & Interactions for piR-41229 Gene

PathCards logo

SuperPathways for piR-41229 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-41229 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-41229 Gene

Drugs & Compounds for piR-41229 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-41229 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-41229 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039DD86_9606 piRNA 32 1

ENA: DQ573117.1:1..32:ncRNA,

piR-41229 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-41229 Gene

No ASD Table

Relevant External Links for piR-41229 Gene

GeneLoc Exon Structure for
piR-41229

No data available for mRNA/cDNA for piR-41229 Gene

Expression for piR-41229 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-41229 Gene

Orthologs for piR-41229 Gene

No data available for Orthologs and Evolution for piR-41229 Gene

Paralogs for piR-41229 Gene

No data available for Paralogs for piR-41229 Gene

Variants for piR-41229 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-41229 Gene

Disorders for piR-41229 Gene

No disorders were found for piR-41229 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-41229 Gene

Publications for piR-41229 Gene

No publications were found for piR-41229 Gene.

No data available for Mastermind for piR-41229 Gene

Products for piR-41229 Gene

Sources for piR-41229 Gene