Aliases for piR-40482 Gene

Data sources for piR-40482 Gene:

Subcategory (RNA class) for piR-40482 Gene

piRNA

Aliases for piR-40482 Gene

  • PiR-40482 (ENA)

Previous GeneCards Identifiers for piR-40482 Gene

  • GC09P114601
  • GC09P114649
  • GC09P114833

No data available for External Ids for piR-40482 Gene

Summaries for piR-40482 Gene

GeneCards Summary for piR-40482 Gene

piR-40482 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-40482 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-40482 Gene

Genomics for piR-40482 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-40482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J114597 Enhancer 0.4 dbSUPER 250.7 +0.5 498 1.2 RFX1 POLR2A RBFOX2 piR-40482 WHRN TMEM268 ATP6V1G1 RF00017-7842
GH09J114586 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -7.8 -7759 7.3 TBP ZBTB10 MXD4 CEBPA DEK MNT SMAD5 ETS1 IRF2 ZFP64 ATP6V1G1 WHRN ZNF618 ENSG00000201749 COL27A1 TMEM268 TNFSF8 AKNA HSALNG0073907 piR-40482
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-40482 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-40482 Gene

Latest Assembly
chr9:114,597,993-114,598,024
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand

Genomic View for piR-40482 Gene

Genes around piR-40482 on UCSC Golden Path with GeneCards custom track
piR-40482 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

piR-40482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-40482 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-40482 Gene

Proteins for piR-40482 Gene

Post-translational modifications for piR-40482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-40482 Gene

Domains & Families for piR-40482 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-40482 Gene

Function for piR-40482 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-40482 Gene

Localization for piR-40482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-40482 Gene

Pathways & Interactions for piR-40482 Gene

PathCards logo

SuperPathways for piR-40482 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-40482 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-40482 Gene

Drugs & Compounds for piR-40482 Gene

No Compound Related Data Available

Transcripts for piR-40482 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-40482 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001E1B7D_9606 piRNA 32 1

ENA: DQ572370.1:1..32:ncRNA,

piR-40482 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-40482 Gene

No ASD Table

Relevant External Links for piR-40482 Gene

GeneLoc Exon Structure for
piR-40482

No data available for mRNA/cDNA for piR-40482 Gene

Expression for piR-40482 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-40482 Gene

Orthologs for piR-40482 Gene

No data available for Orthologs and Evolution for piR-40482 Gene

Paralogs for piR-40482 Gene

No data available for Paralogs for piR-40482 Gene

Variants for piR-40482 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-40482 Gene

Disorders for piR-40482 Gene

No disorders were found for piR-40482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-40482 Gene

Publications for piR-40482 Gene

No publications were found for piR-40482 Gene.

No data available for Mastermind for piR-40482 Gene

Products for piR-40482 Gene

Sources for piR-40482 Gene