Aliases for piR-39416-036 Gene

Subcategory (RNA class) for piR-39416-036 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39416-036 Gene

  • PiR-39416 161

No data available for External Ids for piR-39416-036 Gene

Summaries for piR-39416-036 Gene

GeneCards Summary for piR-39416-036 Gene

piR-39416-036 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39416-036 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39416-036 Gene

Genomics for piR-39416-036 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39416-036 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J113919 Enhancer 0.6 Ensembl ENCODE 0.7 -4.8 -4778 2.9 MAFF MAFK NFE2L2 ARSJ piR-39416-036 lnc-ANK2-7 CAMK2D
GH04J113901 Enhancer 0.6 ENCODE 0.4 -23.2 -23231 1.8 FOXA1 SP1 CTCF CTBP1 FOXA2 YY1 ZNF217 JUND GATA3 RAD21 lnc-ANK2-7 piR-39416-036 ARSJ CAMK2D
GH04J113899 Enhancer 0.7 FANTOM5 ENCODE 0.3 -25.8 -25803 1.6 TCF12 IKZF2 DPF2 RUNX3 IKZF1 TBX21 MTA2 HSF1 lnc-ANK2-7 piR-39416-036 ARSJ CAMK2D
GH04J113922 Enhancer 0.2 Ensembl 0.7 -3.1 -3134 0.2 piR-39416-036 lnc-ANK2-7 ARSJ CAMK2D
GH04J113916 Enhancer 0.2 Ensembl 0.4 -8.9 -8934 0.2 ARSJ piR-39416-036 lnc-ANK2-7 CAMK2D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39416-036 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39416-036 Gene

Genomic Locations for piR-39416-036 Gene
chr4:113,925,635-113,925,661
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand

Genomic View for piR-39416-036 Gene

Genes around piR-39416-036 on UCSC Golden Path with GeneCards custom track
piR-39416-036 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39416-036 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39416-036 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39416-036 Gene

Proteins for piR-39416-036 Gene

Post-translational modifications for piR-39416-036 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39416-036 Gene

Domains & Families for piR-39416-036 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39416-036 Gene

Function for piR-39416-036 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39416-036 Gene

Localization for piR-39416-036 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39416-036 Gene

Pathways & Interactions for piR-39416-036 Gene

PathCards logo

SuperPathways for piR-39416-036 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39416-036 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39416-036 Gene

Drugs & Compounds for piR-39416-036 Gene

No Compound Related Data Available

Transcripts for piR-39416-036 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39416-036 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005DD8CF_9606 piRNA 27 1

ENA: DQ601350.1:1..27:ncRNA,

piR-39416-036 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39416-036 Gene

No ASD Table

Relevant External Links for piR-39416-036 Gene

GeneLoc Exon Structure for
piR-39416-036

No data available for mRNA/cDNA for piR-39416-036 Gene

Expression for piR-39416-036 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39416-036 Gene

Orthologs for piR-39416-036 Gene

No data available for Orthologs and Evolution for piR-39416-036 Gene

Paralogs for piR-39416-036 Gene

No data available for Paralogs for piR-39416-036 Gene

Variants for piR-39416-036 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39416-036 Gene

Disorders for piR-39416-036 Gene

No disorders were found for piR-39416-036 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39416-036 Gene

Publications for piR-39416-036 Gene

No publications were found for piR-39416-036 Gene.

No data available for Mastermind for piR-39416-036 Gene

Products for piR-39416-036 Gene

Sources for piR-39416-036 Gene