Aliases for piR-39341-352 Gene

Subcategory (RNA class) for piR-39341-352 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39341-352 Gene

  • PiR-39341 161

No data available for External Ids for piR-39341-352 Gene

Summaries for piR-39341-352 Gene

GeneCards Summary for piR-39341-352 Gene

piR-39341-352 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39341-352 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39341-352 Gene

Genomics for piR-39341-352 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39341-352 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J038177 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +24.3 24312 4.5 SP1 CREB1 PRDM10 ZNF629 TFE3 IKZF1 KDM1A POLR2A BACH1 FOS STARD3NL TRGC2 piR-39341-352
GH07J038195 Enhancer 0.8 Ensembl ENCODE 0.4 +5.3 5337 6 ZNF512 FOXA1 HDAC1 MGA ZNF316 NR2C2 ZBTB48 MAFG NFIC POLR2A STARD3NL TRGC2 piR-39341-352
GH07J038211 Enhancer 0.6 Ensembl ENCODE 0.4 -9.0 -9002 1.7 TEAD4 JUND ZNF664 SP1 STARD3NL TRGC2 SFRP4 TRGJP2 NONHSAG047369.2 piR-39341-352
GH07J038185 Enhancer 0.5 ENCODE 0.4 +17.1 17109 2.1 PRDM10 PKNOX1 JUND FOSL1 SPI1 EBF1 KLF5 TBX21 ATF7 STARD3NL TRGC1 piR-39341-352 TRGC2
GH07J038182 Enhancer 0.5 ENCODE 0.4 +21.1 21090 0.7 TAL1 TCF12 TEAD4 CBFA2T2 CBFA2T3 ARID1B STARD3NL piR-39341-352 TRGC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39341-352 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39341-352 Gene

Genomic Locations for piR-39341-352 Gene
chr7:38,203,526-38,203,552
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand

Genomic View for piR-39341-352 Gene

Genes around piR-39341-352 on UCSC Golden Path with GeneCards custom track
piR-39341-352 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39341-352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39341-352 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39341-352 Gene

Proteins for piR-39341-352 Gene

Post-translational modifications for piR-39341-352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39341-352 Gene

Domains & Families for piR-39341-352 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39341-352 Gene

Function for piR-39341-352 Gene

Phenotypes From GWAS Catalog for piR-39341-352 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39341-352 Gene

Localization for piR-39341-352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39341-352 Gene

Pathways & Interactions for piR-39341-352 Gene

PathCards logo

SuperPathways for piR-39341-352 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39341-352 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39341-352 Gene

Drugs & Compounds for piR-39341-352 Gene

No Compound Related Data Available

Transcripts for piR-39341-352 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39341-352 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000538D34_9606 piRNA 27 1

ENA: DQ601275.1:1..27:ncRNA,

piR-39341-352 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39341-352 Gene

No ASD Table

Relevant External Links for piR-39341-352 Gene

GeneLoc Exon Structure for
piR-39341-352

No data available for mRNA/cDNA for piR-39341-352 Gene

Expression for piR-39341-352 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39341-352 Gene

Orthologs for piR-39341-352 Gene

No data available for Orthologs and Evolution for piR-39341-352 Gene

Paralogs for piR-39341-352 Gene

No data available for Paralogs for piR-39341-352 Gene

Variants for piR-39341-352 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39341-352 Gene

Disorders for piR-39341-352 Gene

No disorders were found for piR-39341-352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39341-352 Gene

Publications for piR-39341-352 Gene

No publications were found for piR-39341-352 Gene.

No data available for Mastermind for piR-39341-352 Gene

Products for piR-39341-352 Gene

Sources for piR-39341-352 Gene