Aliases for piR-39341-019 Gene

Subcategory (RNA class) for piR-39341-019 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39341-019 Gene

  • PiR-39341 161

No data available for External Ids for piR-39341-019 Gene

Summaries for piR-39341-019 Gene

GeneCards Summary for piR-39341-019 Gene

piR-39341-019 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39341-019 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39341-019 Gene

Genomics for piR-39341-019 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39341-019 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J159556 Enhancer 0.6 Ensembl 0.4 -16.8 -16830 0.6 REST SP1 FOXA2 ATF3 YY1 ZBTB33 JUND NR2F2 RAD21 HNF4A ENSG00000231100 LOC646430 lnc-APCS-2 ACKR1 piR-39341-019 OR10J5 APCS
GH01J159553 Enhancer 0.3 Ensembl 0.4 -14.4 -14430 1.8 SPI1 ENSG00000231100 lnc-APCS-2 piR-39341-019 OR10J5 APCS
GH01J159545 Enhancer 0.2 FANTOM5 0.4 -5.7 -5701 0 OR10J5 piR-39341-019 ENSG00000231100 lnc-APCS-2 APCS
GH01J159548 Enhancer 0.2 Ensembl 0.4 -8.0 -8030 0.6 ENSG00000231100 piR-39341-019 lnc-APCS-2 OR10J5 APCS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39341-019 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39341-019 Gene

Genomic Locations for piR-39341-019 Gene
chr1:159,540,245-159,540,271
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand

Genomic View for piR-39341-019 Gene

Genes around piR-39341-019 on UCSC Golden Path with GeneCards custom track
piR-39341-019 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39341-019 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39341-019 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39341-019 Gene

Proteins for piR-39341-019 Gene

Post-translational modifications for piR-39341-019 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39341-019 Gene

Domains & Families for piR-39341-019 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39341-019 Gene

Function for piR-39341-019 Gene

Phenotypes From GWAS Catalog for piR-39341-019 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39341-019 Gene

Localization for piR-39341-019 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39341-019 Gene

Pathways & Interactions for piR-39341-019 Gene

PathCards logo

SuperPathways for piR-39341-019 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39341-019 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39341-019 Gene

Drugs & Compounds for piR-39341-019 Gene

No Compound Related Data Available

Transcripts for piR-39341-019 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39341-019 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000538D34_9606 piRNA 27 1

ENA: DQ601275.1:1..27:ncRNA,

piR-39341-019 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39341-019 Gene

No ASD Table

Relevant External Links for piR-39341-019 Gene

GeneLoc Exon Structure for
piR-39341-019

No data available for mRNA/cDNA for piR-39341-019 Gene

Expression for piR-39341-019 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39341-019 Gene

Orthologs for piR-39341-019 Gene

No data available for Orthologs and Evolution for piR-39341-019 Gene

Paralogs for piR-39341-019 Gene

No data available for Paralogs for piR-39341-019 Gene

Variants for piR-39341-019 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39341-019 Gene

Disorders for piR-39341-019 Gene

No disorders were found for piR-39341-019 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39341-019 Gene

Publications for piR-39341-019 Gene

No publications were found for piR-39341-019 Gene.

No data available for Mastermind for piR-39341-019 Gene

Products for piR-39341-019 Gene

Sources for piR-39341-019 Gene