Aliases for piR-39229 Gene

Subcategory (RNA class) for piR-39229 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39229 Gene

  • PiR-39229 161

No data available for External Ids for piR-39229 Gene

Summaries for piR-39229 Gene

GeneCards Summary for piR-39229 Gene

piR-39229 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39229 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39229 Gene

Genomics for piR-39229 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39229 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J026905 Enhancer 0.4 Ensembl 600.7 -1.4 -1426 0.2 TEAD4 KDM1A ZNF623 SP1 ENSG00000235271 piR-39229 RNU6-1066P LINC01422 LOC284898 CRYBB1
GH22J026903 Promoter/Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.7 -2.8 -2808 1.4 EZH2 ENSG00000235271 RNU6-1066P piR-39229 LINC01422 LOC284898 CRYBB1
GH22J026923 Enhancer 0.5 Ensembl 0.4 +17.5 17474 1.2 REST KDM1A ESRRA EHMT2 SIN3A ZNF143 MIER2 BACH1 piR-60606 piR-39229 LINC01422 LOC284898 CRYBB1
GH22J026912 Enhancer 0.3 Ensembl 0.4 +7.1 7074 1.2 ZNF768 ENSG00000235271 piR-39229 piR-60606 LINC01422 LOC284898 CRYBB1
GH22J026909 Enhancer 0.2 Ensembl 0.7 +4.2 4174 0.2 piR-39229 ENSG00000235271 piR-60606 LINC01422 LOC284898 CRYBB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39229 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39229 Gene

Genomic Locations for piR-39229 Gene
chr22:26,906,127-26,906,152
(GRCh38/hg38)
Size:
26 bases
Orientation:
Plus strand

Genomic View for piR-39229 Gene

Genes around piR-39229 on UCSC Golden Path with GeneCards custom track
piR-39229 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39229 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39229 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39229 Gene

Proteins for piR-39229 Gene

Post-translational modifications for piR-39229 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39229 Gene

Domains & Families for piR-39229 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39229 Gene

Function for piR-39229 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39229 Gene

Localization for piR-39229 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39229 Gene

Pathways & Interactions for piR-39229 Gene

PathCards logo

SuperPathways for piR-39229 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39229 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39229 Gene

Drugs & Compounds for piR-39229 Gene

No Compound Related Data Available

Transcripts for piR-39229 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39229 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000009CCEF_9606 piRNA 26 1

ENA: DQ601163.1:1..26:ncRNA,

piR-39229 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39229 Gene

No ASD Table

Relevant External Links for piR-39229 Gene

GeneLoc Exon Structure for
piR-39229

No data available for mRNA/cDNA for piR-39229 Gene

Expression for piR-39229 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39229 Gene

Orthologs for piR-39229 Gene

No data available for Orthologs and Evolution for piR-39229 Gene

Paralogs for piR-39229 Gene

No data available for Paralogs for piR-39229 Gene

Variants for piR-39229 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39229 Gene

Disorders for piR-39229 Gene

No disorders were found for piR-39229 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39229 Gene

Publications for piR-39229 Gene

No publications were found for piR-39229 Gene.

No data available for Mastermind for piR-39229 Gene

Products for piR-39229 Gene

Sources for piR-39229 Gene