Aliases for piR-39099-242 Gene

Subcategory (RNA class) for piR-39099-242 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39099-242 Gene

  • PiR-39099 161

No data available for External Ids for piR-39099-242 Gene

Summaries for piR-39099-242 Gene

GeneCards Summary for piR-39099-242 Gene

piR-39099-242 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39099-242 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39099-242 Gene

Genomics for piR-39099-242 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39099-242 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J119442 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.8 -4807 8.8 ATF7 ZNF629 TFE3 LEF1 IKZF1 BACH1 JUND PKNOX1 ZNF24 RXRB MAN1A1 ENSG00000216316 piR-39099-242 LOC105377973 LOC285762
GH06J119458 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -17.8 -17784 1.4 RFX1 RELA IKZF2 TRIM22 DPF2 RELB RUNX3 ZNF316 BCLAF1 MAFF MAN1A1 piR-39099-242 LOC105377973 LOC285762
GH06J119475 Enhancer 0.7 Ensembl dbSUPER 0.3 -34.9 -34881 0.8 NR2F1 POLR2A BATF SMARCA4 MTA2 SPI1 IKZF1 LOC105377973 piR-39099-242 MAN1A1 LOC285762
GH06J119430 Enhancer 0.5 ENCODE 0.4 +10.8 10754 0.8 CEBPG CEBPB HLF DACH1 PKNOX1 MAN1A1 piR-39099-242 piR-52879-018 LOC285762
GH06J119454 Enhancer 0.3 Ensembl dbSUPER 0.4 -13.0 -13007 1.2 piR-39099-242 LOC105377973 MAN1A1 LOC285762
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39099-242 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39099-242 Gene

Genomic Locations for piR-39099-242 Gene
chr6:119,441,765-119,441,794
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand

Genomic View for piR-39099-242 Gene

Genes around piR-39099-242 on UCSC Golden Path with GeneCards custom track
piR-39099-242 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39099-242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39099-242 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39099-242 Gene

Proteins for piR-39099-242 Gene

Post-translational modifications for piR-39099-242 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39099-242 Gene

Domains & Families for piR-39099-242 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39099-242 Gene

Function for piR-39099-242 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39099-242 Gene

Localization for piR-39099-242 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39099-242 Gene

Pathways & Interactions for piR-39099-242 Gene

PathCards logo

SuperPathways for piR-39099-242 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39099-242 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39099-242 Gene

Drugs & Compounds for piR-39099-242 Gene

No Compound Related Data Available

Transcripts for piR-39099-242 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39099-242 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000015321D_9606 piRNA 30 1

ENA: DQ601033.1:1..30:ncRNA,

piR-39099-242 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39099-242 Gene

No ASD Table

Relevant External Links for piR-39099-242 Gene

GeneLoc Exon Structure for
piR-39099-242

No data available for mRNA/cDNA for piR-39099-242 Gene

Expression for piR-39099-242 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39099-242 Gene

Orthologs for piR-39099-242 Gene

No data available for Orthologs and Evolution for piR-39099-242 Gene

Paralogs for piR-39099-242 Gene

No data available for Paralogs for piR-39099-242 Gene

Variants for piR-39099-242 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39099-242 Gene

Disorders for piR-39099-242 Gene

No disorders were found for piR-39099-242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39099-242 Gene

Publications for piR-39099-242 Gene

No publications were found for piR-39099-242 Gene.

No data available for Mastermind for piR-39099-242 Gene

Products for piR-39099-242 Gene

Sources for piR-39099-242 Gene