Aliases for piR-39099-217 Gene

Subcategory (RNA class) for piR-39099-217 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39099-217 Gene

  • PiR-39099 161

No data available for External Ids for piR-39099-217 Gene

Summaries for piR-39099-217 Gene

GeneCards Summary for piR-39099-217 Gene

piR-39099-217 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39099-217 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39099-217 Gene

Genomics for piR-39099-217 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39099-217 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J000422 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.7 -2.9 -2877 2 GATAD2A ZNF629 TFE3 NFKBIZ RCOR2 RXRB IRF2 GABPA CEBPA SOX13 IRF4 DUSP22 piR-39099-217 HSALNG0047286 HUS1B
GH06J000398 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.5 -26483 2.4 POLR2A BACH1 LARP7 STAT3 RELA SMAD5 IKZF2 SIN3A ARID3A RELB ENSG00000205653 IRF4 DUSP22 EXOC2 HSALNG0047286 piR-39099-217 HUS1B
GH06J000408 Enhancer 0.9 Ensembl ENCODE 0.4 -17.1 -17077 1.2 CTCF RFX1 POLR2A BACH1 REST TRIM22 FOXJ2 RUNX3 RNF2 BCLAF1 ENSG00000205653 HSALNG0047286 IRF4 piR-39099-217 HUS1B
GH06J000407 Enhancer 0.9 Ensembl ENCODE 0.4 -21.6 -21577 2.6 POLR2A BACH1 LARP7 STAT3 SMAD5 SIN3A ELK1 BCLAF1 CBFB TCF12 ENSG00000205653 HSALNG0047286 IRF4 piR-39099-217 HUS1B
GH06J000395 Enhancer 0.7 ENCODE dbSUPER 0.3 -30.7 -30722 0.2 POLR2A LARP7 SIN3A CHD1 WRNIP1 TBL1XR1 ATF2 ZNF664 MLLT1 HSALNG0047286 IRF4 piR-39099-217 HUS1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39099-217 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39099-217 Gene

Genomic Locations for piR-39099-217 Gene
chr6:425,878-425,907
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-39099-217 Gene

Genes around piR-39099-217 on UCSC Golden Path with GeneCards custom track
piR-39099-217 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39099-217 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39099-217 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39099-217 Gene

Proteins for piR-39099-217 Gene

Post-translational modifications for piR-39099-217 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39099-217 Gene

Domains & Families for piR-39099-217 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39099-217 Gene

Function for piR-39099-217 Gene

Phenotypes From GWAS Catalog for piR-39099-217 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39099-217 Gene

Localization for piR-39099-217 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39099-217 Gene

Pathways & Interactions for piR-39099-217 Gene

PathCards logo

SuperPathways for piR-39099-217 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39099-217 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39099-217 Gene

Drugs & Compounds for piR-39099-217 Gene

No Compound Related Data Available

Transcripts for piR-39099-217 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39099-217 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000015321D_9606 piRNA 30 1

ENA: DQ601033.1:1..30:ncRNA,

piR-39099-217 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39099-217 Gene

No ASD Table

Relevant External Links for piR-39099-217 Gene

GeneLoc Exon Structure for
piR-39099-217

No data available for mRNA/cDNA for piR-39099-217 Gene

Expression for piR-39099-217 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39099-217 Gene

Orthologs for piR-39099-217 Gene

No data available for Orthologs and Evolution for piR-39099-217 Gene

Paralogs for piR-39099-217 Gene

No data available for Paralogs for piR-39099-217 Gene

Variants for piR-39099-217 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39099-217 Gene

Disorders for piR-39099-217 Gene

No disorders were found for piR-39099-217 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39099-217 Gene

Publications for piR-39099-217 Gene

No publications were found for piR-39099-217 Gene.

No data available for Mastermind for piR-39099-217 Gene

Products for piR-39099-217 Gene

Sources for piR-39099-217 Gene